RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TIMM9Q9Y5J7 89 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 SLC25A15Q9Y619 301 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 Q56UQ5 140 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 MIC13Q5XKP0 118 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 OR2T6Q8NHC8 308 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 ERVFRD-1P60508 538 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 SLC35B1P78383 322 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 BSCL2Q96G97 398 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 QTRT1Q9BXR0 403 aaKnown RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 METTL1Q9UBP6 276 aaKnown RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 G3V3Q6 166 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 FBP1P09467 338 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 MYPOPQ86VE0 399 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 IGHV3-21A0A0B4J1V1 117 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 PDE6DO43924 150 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 C10orf113Q5VZT2 155 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 EML6Q6ZMW3 1958 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 LRP11Q86VZ4 500 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 SEBOXQ9HB31 216 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 WASHC3Q9Y3C0 194 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 PTPRQQ9UMZ3 2332 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 PPIAL4CA0A0B4J2A2 164 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 M0QZK8 103 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 GGCTO75223 188 aaKnown RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 CT45A10P0DMU9 189 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 PPIAL4GP0DN37 164 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF525Q8N782 197 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 GRAMD2BQ96HH9 432 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 PIEZO1Q92508 2521 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 GNG4P50150 75 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 PAFAH1B2P68402 229 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 OR9G1Q8NH87 305 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 TRAPPC1Q9Y5R8 145 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 IGLV3-1P01715 115 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 PAX5Q02548 391 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 AARDQ4LEZ3 155 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 MORN2Q502X0 79 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 MMD2Q8IY49 270 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM171Q8WVE6 324 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 UBTD1Q9HAC8 227 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 KBTBD11-OT1A0A1B0GTJ5 212 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 SIRT7Q9NRC8 400 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 J3QR89 54 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 AP4M1O00189 453 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 APELAP0DMC3 54 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 FAM216AQ8WUB2 273 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 P2RX4Q99571 388 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 LPAR2Q9HBW0 351 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 ASCL3Q9NQ33 180 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 TOX4O94842 621 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 PCSK4Q6UW60 755 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 OR4F17Q8NGA8 305 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 IGKV3-15P01624 115 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 ARF6P62330 175 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 NCMAPQ5T1S8 102 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 CLEC2AQ6UVW9 174 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 Q6ZS49 121 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 DOLPP1Q86YN1 238 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 OR2T10Q8NGZ9 312 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 BLNKQ8WV28 456 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 VKORC1Q9BQB6 163 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 CARHSP1Q9Y2V2 147 aaKnown RBP5.27□□□□□ -1.57
PRKDC-202ENST00000338368 YPEL1O60688 119 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 USF1P22415 310 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF439Q8NDP4 499 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 YPEL2Q96QA6 119 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 RALYQ9UKM9 306 aaKnown RBP5.27□□□□□ -1.57
PRKDC-202ENST00000338368 GNG7O60262 68 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 SPINK4O60575 86 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 SNRPCP09234 159 aaKnown RBP5.27□□□□□ -1.57
PRKDC-202ENST00000338368 MEF2BQ02080 365 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-202ENST00000338368 NABP2Q9BQ15 211 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 HABP2Q14520 560 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-202ENST00000338368 SPOCK3Q9BQ16 436 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 TXNDC17Q9BRA2 123 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 CXorf1O96002 111 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 SPP1P10451 314 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 HIF1ANQ9NWT6 349 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 ANAPC10Q9UM13 185 aa5.27□□□□□ -1.57
PRKDC-202ENST00000338368 TRBV6-6A0A0A6YYG2 114 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 TM4SF5O14894 197 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 SLC25A17O43808 307 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 CLN5O75503 358 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 SPACA3Q8IXA5 215 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 OR10G8Q8NGN5 311 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM190Q8WZ59 177 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 PSMG3Q9BT73 122 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 COA4Q9NYJ1 87 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 ELOA3CA0A087WX78 387 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 LYPD6Q86Y78 171 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 TOLLIPQ9H0E2 274 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 LYZP61626 148 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 MBNL2Q5VZF2 373 aaKnown RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF474Q6S9Z5 364 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 OSR1Q8TAX0 266 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 PCGF1Q9BSM1 259 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 COL4A3Q01955 1670 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 PLXNB1O43157 2135 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms