RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 DLL3Q9NYJ7 618 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 CEACAM8P31997 349 aaPredicted RBP11.26□□□□□ -0.61
COL2A1-201ENST00000337299 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 TMEM108Q6UXF1 575 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 LINC01551Q86U37 167 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 PGLYRP4Q96LB8 373 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 IGHV3-48P01763 117 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 CELA2AP08217 269 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 GCHFRP30047 84 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 RAC3P60763 192 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 H3BTX0 84 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 CCL11P51671 97 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 C1orf185Q5T7R7 199 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 STPG4Q8N801 248 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 OCIAD1Q9NX40 245 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 C3orf80F5H4A9 247 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 TMEM50AO95807 157 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 IGHMP01871 453 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 IGKV3-11P04433 115 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 LINC00869P0C866 280 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 APELAP0DMC3 54 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 PRSS8Q16651 343 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 RNASE8Q8TDE3 154 aaKnown RBP11.25□□□□□ -0.61
COL2A1-201ENST00000337299 SPSB4Q96A44 273 aa11.25□□□□□ -0.61
COL2A1-201ENST00000337299 RALYQ9UKM9 306 aaKnown RBP11.25□□□□□ -0.61
COL2A1-201ENST00000337299 LILRA1O75019 489 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 MT-CO3P00414 261 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 CCL4P13236 92 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 SUB1P53999 127 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL2A1-201ENST00000337299 TDRG1Q3Y452 100 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 RHBDD2Q6NTF9 364 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 C3orf79P0CE67 100 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 SCGB1C2P0DMR2 95 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 CA7P43166 264 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 PDPNQ86YL7 162 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 LRTM2Q8N967 370 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 GPR35Q9HC97 309 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 SP1P08047 785 aa11.24□□□□□ -0.61
COL2A1-201ENST00000337299 A0A1W2PN81 502 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 A0A1W2PRD5 423 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 A0A1W2PRF3 423 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 A0A1W2PRM7 423 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 EFEMP2O95967 443 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 CRYABP02511 175 aaKnown RBP11.23□□□□□ -0.61
COL2A1-201ENST00000337299 ARF6P62330 175 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 SMIM21Q3B7S5 101 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 OR1B1Q8NGR6 318 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 ADTRPQ96IZ2 230 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 HSPB7Q9UBY9 170 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 IGKV1-12A0A0C4DH73 117 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 LRRC30A6NM36 301 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 WISP1O95388 367 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 IGKV1D-12P01611 117 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 Q8IYB0 196 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
COL2A1-201ENST00000337299 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
COL2A1-201ENST00000337299 LIME1Q9H400 295 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 IGHV3-21A0A0B4J1V1 117 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 A0A1B0GV72 72 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 RPL8P62917 257 aaKnown RBP11.23□□□□□ -0.61
COL2A1-201ENST00000337299 IGLV3-21P80748 117 aaPredicted RBP11.23□□□□□ -0.61
COL2A1-201ENST00000337299 C3AR1Q16581 482 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 Q6ZWC4 215 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 J3QT63 122 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 TSPOP30536 169 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 KCNE4Q8WWG9 221 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 TMEM45BQ96B21 275 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 TXNDC17Q9BRA2 123 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 LOXL2Q9Y4K0 774 aa11.23□□□□□ -0.61
COL2A1-201ENST00000337299 A0A0G2JRQ6 117 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 OR2H2O95918 312 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 HBZP02008 142 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 IGFBP7Q16270 282 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 KRTCAP3Q53RY4 240 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 C1orf210Q8IVY1 113 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 ELOVL5Q9NYP7 299 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 MPC1Q9Y5U8 109 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 GATA2P23769 480 aaPredicted RBP11.22□□□□□ -0.61
COL2A1-201ENST00000337299 TMEM97Q5BJF2 176 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 TUSC5Q8IXB3 177 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 FBXL7Q9UJT9 491 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 PI4KAP42356 2102 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 SSTR5P35346 364 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 CEACAM21Q3KPI0 293 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 ZNF826PQ6ZT77 177 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 ZPBPQ9BS86 351 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 COX11Q9Y6N1 276 aa11.22□□□□□ -0.61
COL2A1-201ENST00000337299 TRBV9A0A0B4J1U6 114 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 LHX2P50458 406 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 SLC35E4Q6ICL7 350 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 PET117Q6UWS5 81 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 ORAOV1Q8WV07 137 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 ZNF524Q96C55 264 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 CDC42EP3Q9UKI2 254 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 TIMM9Q9Y5J7 89 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms