RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 IRF2P14316 349 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 NBL1P41271 181 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 FABP9Q0Z7S8 132 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 STUMQ69YW2 141 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 C19orf35Q6ZS72 473 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 SAP30LQ9HAJ7 183 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 KBTBD11-OT1A0A1B0GTJ5 212 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 PPIHO43447 177 aaKnown RBP7.27□□□□□ -1.25
SNCA-201ENST00000336904 ACAA1P09110 424 aaPredicted RBP7.27□□□□□ -1.25
SNCA-201ENST00000336904 OR8U8P0C7N1 319 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 CD81P60033 236 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 RAB5BP61020 215 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 ERVK-16P61578 105 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 HTD2P86397 168 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 EIF2S3LQ2VIR3 472 aaKnown RBP7.27□□□□□ -1.25
SNCA-201ENST00000336904 C10orf55Q5SWW7 151 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 SPATA31B1PQ5VZV4 182 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 CST9LP1Q5W188 147 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 OR4A47Q6IF82 309 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 LINC00518Q8N0U6 118 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 C15orf54Q8N8G6 183 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 ZNF709Q8N972 641 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 CA5BP1Q8WTZ4 195 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 TMEM147Q9BVK8 224 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
SNCA-201ENST00000336904 MS4A5Q9H3V2 200 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 RAXQ9Y2V3 346 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 UTP20O75691 2785 aaKnown RBP7.27□□□□□ -1.25
SNCA-201ENST00000336904 ATP5G3P48201 142 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 RELBQ01201 579 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 IGF2-ASQ6U949 168 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 ZNF66Q6ZN08 573 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 PPP1R35Q8TAP8 253 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 ZCCHC14Q8WYQ9 949 aaKnown RBP7.26□□□□□ -1.25
SNCA-201ENST00000336904 ELOVL1Q9BW60 279 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 SLC25A10Q9UBX3 287 aaPredicted RBP7.26□□□□□ -1.25
SNCA-201ENST00000336904 JPT1Q9UK76 154 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 TCF19Q9Y242 345 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 HPRT1P00492 218 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 CD1BP29016 333 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 CHRNB4P30926 498 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 RPL31P62899 125 aaKnown RBP7.26□□□□□ -1.25
SNCA-201ENST00000336904 TVP23CQ96ET8 276 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 SMIM7Q9BQ49 75 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 DYNLRB1Q9NP97 96 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 BIN3Q9NQY0 253 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 CRYBG3Q68DQ2 2970 aa7.26□□□□□ -1.25
SNCA-201ENST00000336904 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 YPEL1O60688 119 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 HBE1P02100 147 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 MT-ND4LP03901 98 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 REG1AP05451 166 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 RNF212Q495C1 297 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 GFI1BQ5VTD9 330 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 SP5Q6BEB4 398 aaPredicted RBP7.25□□□□□ -1.25
SNCA-201ENST00000336904 ZBTB34Q8NCN2 500 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 YPEL2Q96QA6 119 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 ZNF251Q9BRH9 671 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 MRPL20Q9BYC9 149 aaKnown RBP7.25□□□□□ -1.25
SNCA-201ENST00000336904 IL19Q9UHD0 177 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 IGHV3-21A0A0B4J1V1 117 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 C17orf100A8MU93 164 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 E7EUB6 86 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 TNFSF4P23510 183 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 MZT1Q08AG7 82 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 ELOBQ15370 118 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 RHEBQ15382 184 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 KRTCAP3Q53RY4 240 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 NANPQ8TBE9 248 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 COA4Q9NYJ1 87 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 CTSZQ9UBR2 303 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 CSMD2Q7Z408 3487 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 HIVEP3Q5T1R4 2406 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 F2RL2O00254 374 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 GFRA3O60609 400 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 FOXH1O75593 365 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 CA2P00918 260 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 TRGC2P03986 189 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 NDUFA6P56556 154 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 KHDC3LQ587J8 217 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 TREML4Q6UXN2 200 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 ZNF788Q6ZQV5 615 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 ZNF561Q8N587 486 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 RITA1Q96K30 269 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 MGST2Q99735 147 aa7.25□□□□□ -1.25
SNCA-201ENST00000336904 ZNF98A6NK75 572 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 E7EQL1 145 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 CT45A6P0DMU7 189 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 CT45A5P0DMU8 189 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 CT45A7P0DMV0 189 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 CGB3P0DN86 165 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 CGB7P0DN87 165 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 MEF2BQ02080 365 aaPredicted RBP7.24□□□□□ -1.25
SNCA-201ENST00000336904 ARSJQ5FYB0 599 aaPredicted RBP7.24□□□□□ -1.25
SNCA-201ENST00000336904 Q8N7P7 452 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 OR13D1Q8NGV5 346 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 ABHD5Q8WTS1 349 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 FAM216AQ8WUB2 273 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 PSMG3Q9BT73 122 aaPredicted RBP7.24□□□□□ -1.25
SNCA-201ENST00000336904 TPSG1Q9NRR2 321 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms