RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 C11orf94C9JXX5 98 aa12.25□□□□□ -0.45
UBA1-201ENST00000335972 FABP4P15090 132 aa12.25□□□□□ -0.45
UBA1-201ENST00000335972 ERVK-16P61578 105 aa12.25□□□□□ -0.45
UBA1-201ENST00000335972 C1QL4Q86Z23 238 aa12.25□□□□□ -0.45
UBA1-201ENST00000335972 PCGF1Q9BSM1 259 aa12.25□□□□□ -0.45
UBA1-201ENST00000335972 ABCA4P78363 2273 aa12.25□□□□□ -0.45
UBA1-201ENST00000335972 MBD3L4A6NDZ8 208 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 MBD3L3A6NE82 208 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 MBD3L5A6NJ08 208 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 HTD2P86397 168 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 TNFAIP6P98066 277 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 C17orf58Q2M2W7 97 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 SPATA31B1PQ5VZV4 182 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 WFDC8Q8IUA0 241 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 Q8N7P7 452 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 MBD3L2Q8NHZ7 208 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 CIB3Q96Q77 187 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 ZNF891A8MT65 544 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 HPRT1P00492 218 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 S100PP25815 95 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 FAM3BP58499 235 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 A0A1W2PPV4 95 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 KBTBD11O94819 623 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 NDUFB7P17568 137 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 S100A2P29034 98 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 PRB3Q04118 309 aaPredicted RBP12.24□□□□□ -0.45
UBA1-201ENST00000335972 C9orf152Q5JTZ5 239 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 RHOVQ96L33 236 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 GCM1Q9NP62 436 aa12.24□□□□□ -0.45
UBA1-201ENST00000335972 REG1BP48304 166 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 RELBQ01201 579 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 TCF19Q9Y242 345 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 TIMM9Q9Y5J7 89 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 CSMD1Q96PZ7 3565 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 H7BYZ3 331 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 ACTL6BO94805 426 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 NDUFB4O95168 129 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 IGHV1-46P01743 117 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 CDX1P47902 265 aaPredicted RBP12.23□□□□□ -0.45
UBA1-201ENST00000335972 PDLIM3Q53GG5 364 aaPredicted RBP12.23□□□□□ -0.45
UBA1-201ENST00000335972 TREML4Q6UXN2 200 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 WFIKKN1Q96NZ8 548 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 P2RX4Q99571 388 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 MGST2Q99735 147 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 GFOD1Q9NXC2 390 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 RBMXL3Q8N7X1 1067 aaKnown RBP12.23□□□□□ -0.45
UBA1-201ENST00000335972 ZNF114Q8NC26 417 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 OR13D1Q8NGV5 346 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 PPP1R35Q8TAP8 253 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 HIPK2Q9H2X6 1198 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 GAR1Q9NY12 217 aaKnown RBP12.23□□□□□ -0.45
UBA1-201ENST00000335972 JPT1Q9UK76 154 aa12.23□□□□□ -0.45
UBA1-201ENST00000335972 CXorf65A6NEN9 183 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 PPP1R2P9O14990 202 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 GLRXP35754 106 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 GALR1P47211 349 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
UBA1-201ENST00000335972 MLANAQ16655 118 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 TIMM23BQ5SRD1 257 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 WDR83OSQ9Y284 106 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 DYSFO75923 2080 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 TMPRSS2O15393 492 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 GFRA3O60609 400 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 IGKV1-16P04430 117 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
UBA1-201ENST00000335972 MRPS11P82912 194 aaKnown RBP12.22□□□□□ -0.45
UBA1-201ENST00000335972 ACOT6Q3I5F7 207 aaPredicted RBP12.22□□□□□ -0.45
UBA1-201ENST00000335972 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 CYP2G1PQ6ZSU1 146 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 B4DEV8 164 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 GNB2P62879 340 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 S100A12P80511 92 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 OR4A47Q6IF82 309 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 TCF23Q7RTU1 214 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 CENPVQ7Z7K6 275 aaPredicted RBP12.22□□□□□ -0.45
UBA1-201ENST00000335972 OR4X1Q8NH49 305 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 TMEM37Q8WXS4 190 aa12.22□□□□□ -0.45
UBA1-201ENST00000335972 RAI1Q7Z5J4 1906 aaPredicted RBP12.21□□□□□ -0.45
UBA1-201ENST00000335972 C17orf112F2Z3M2 114 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 YPEL1O60688 119 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 FOXH1O75593 365 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 SPCS3P61009 180 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 GNB1P62873 340 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 NEIL1Q96FI4 390 aaPredicted RBP12.21□□□□□ -0.45
UBA1-201ENST00000335972 YPEL2Q96QA6 119 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 PXMP4Q9Y6I8 212 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 NAV3Q8IVL0 2385 aa12.21□□□□□ -0.45
UBA1-201ENST00000335972 C1QTNF9P0C862 333 aa12.21□□□□□ -0.46
UBA1-201ENST00000335972 VDAC2P45880 294 aaPredicted RBP12.21□□□□□ -0.46
UBA1-201ENST00000335972 CISD2Q8N5K1 135 aaKnown RBP12.21□□□□□ -0.46
UBA1-201ENST00000335972 PARD6GQ9BYG4 376 aaPredicted RBP12.21□□□□□ -0.46
UBA1-201ENST00000335972 RNF7Q9UBF6 113 aa12.21□□□□□ -0.46
UBA1-201ENST00000335972 ATRXP46100 2492 aa12.21□□□□□ -0.46
UBA1-201ENST00000335972 CUL9Q8IWT3 2517 aa12.21□□□□□ -0.46
UBA1-201ENST00000335972 IGHV3-48P01763 117 aa12.2□□□□□ -0.46
UBA1-201ENST00000335972 SNRPCP09234 159 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms