RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 GTF3AQ92664 365 aaKnown RBP4.74□□□□□ -1.65
PTPRB-202ENST00000334414 FAM157AC9JC47 383 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 CCL20P78556 96 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF56Q15929 161 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 OR10W1Q8NGF6 305 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 DNAJC30Q96LL9 226 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 TRAV8-6A0A0B4J262 113 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 SUMO2P61956 95 aaKnown RBP4.73□□□□□ -1.65
PTPRB-202ENST00000334414 CHAC1Q9BUX1 264 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF708P17019 499 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 BIVMQ86UB2 503 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 FGFRL1Q8N441 504 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 SLC50A1Q9BRV3 221 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 SLC25A39Q9BZJ4 359 aaPredicted RBP4.73□□□□□ -1.65
PTPRB-202ENST00000334414 FBLN5Q9UBX5 448 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 UPK2O00526 184 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 OR2H2O95918 312 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 CEACAM1P13688 526 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 GCSAMLQ5JQS6 135 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 FOXC2Q99958 501 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 TMEM14DPA8MWL7 114 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 PEX7O00628 323 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 GPX1P07203 203 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 OR9G9P0C7N8 305 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 CRYBB3P26998 211 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 TM4SF4P48230 202 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 SOX8P57073 446 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 ZP1P60852 638 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 DUSP2Q05923 314 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 EEF1AKMT3Q96AZ1 226 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 TDRD15B5MCY1 1934 aaKnown RBP4.73□□□□□ -1.65
PTPRB-202ENST00000334414 RNF222A6NCQ9 220 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 PPIHO43447 177 aaKnown RBP4.73□□□□□ -1.65
PTPRB-202ENST00000334414 IL11P20809 199 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 GPR6P46095 362 aaPredicted RBP4.73□□□□□ -1.65
PTPRB-202ENST00000334414 TMEM170BQ5T4T1 132 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF562Q6V9R5 426 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 GOLT1AQ6ZVE7 132 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 KLF17Q5JT82 389 aaPredicted RBP4.73□□□□□ -1.65
PTPRB-202ENST00000334414 DNASE2BQ8WZ79 361 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 FAM106AQ4KMX7 169 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 VN1R4Q7Z5H5 301 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 ATOH7Q8N100 152 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 EPDR1Q9UM22 224 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 TRBV7-9A0A0J9YWB2 115 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 M0R2P5 195 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 UCP1P25874 307 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 ASCL4Q6XD76 172 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 RTN4RL2Q86UN3 420 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 SPAG8Q99932 426 aaPredicted RBP4.73□□□□□ -1.65
PTPRB-202ENST00000334414 WNT10AQ9GZT5 417 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 COX11Q9Y6N1 276 aa4.73□□□□□ -1.65
PTPRB-202ENST00000334414 A0A1W2PRE2 83 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ITGB1BP1O14713 200 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PVRIGQ6DKI7 326 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 LINC00305Q7Z4B0 112 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 OR52E5Q8NH55 327 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ASCL2Q99929 193 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TMEM74BQ9NUR3 256 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TRAV5A0A0B4J249 113 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 MLNRO43193 412 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 SRFP11831 508 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 SMAD4Q13485 552 aaKnown RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 GFRALQ6UXV0 394 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 SF3B6Q9Y3B4 125 aaKnown RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 CD3EP07766 207 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TDGF1P3P51864 188 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 FXYD3Q14802 87 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 C14orf144Q96I85 54 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PLAC1Q9HBJ0 212 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 hCG_38984A0A1B0GV85 526 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 UPK3AO75631 287 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 CXCL10P02778 98 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ICAM4Q14773 271 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF362Q5T0B9 420 aaPredicted RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TSKUQ8WUA8 353 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PGPA6NDG6 321 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 SRD5A1P18405 259 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TMEM95Q3KNT9 176 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 KRTCAP3Q53RY4 240 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 C1QL3Q5VWW1 255 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 KIR3DL3Q8N743 410 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 BEX4Q9NWD9 120 aaPredicted RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PPIAL4EA0A075B759 164 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PRRT4C9JH25 899 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PPIAL4DF5H284 164 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 CD5LO43866 347 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PPIAL4FP0DN26 164 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ADMP35318 185 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 FER1L6-AS1Q8NA97 138 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PRR13Q9NZ81 148 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 PPIAL4AQ9Y536 164 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 HIGD1CA8MV81 97 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF83P51522 516 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 LAGE3Q14657 143 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TDHQ8IZJ6 230 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TMEM86BQ8N661 226 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF488Q96MN9 340 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 RSPO3Q9BXY4 272 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms