RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 DEFA5Q01523 94 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 ZNF345Q14585 488 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 GLYATL2Q8WU03 294 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 NARS2Q96I59 477 aaKnown RBP13.21□□□□□ -0.29
SHOX-201ENST00000334060 AKR1E2Q96JD6 320 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 PLXNB1O43157 2135 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 JMJD1CQ15652 2540 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 TEX13DA0A0J9YY54 714 aaPredicted RBP13.21□□□□□ -0.29
SHOX-201ENST00000334060 C3orf85A0A1B0GTC6 90 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 IL3RAP26951 378 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 DHRS2Q13268 280 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 C2orf68Q2NKX9 166 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 C9orf139Q6ZV77 190 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 SSX9Q7RTT3 188 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.21□□□□□ -0.29
SHOX-201ENST00000334060 CHIAQ9BZP6 476 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 ALX4Q9H161 411 aaPredicted RBP13.21□□□□□ -0.29
SHOX-201ENST00000334060 SLC35D1Q9NTN3 355 aa13.21□□□□□ -0.29
SHOX-201ENST00000334060 CHST1O43916 411 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 MYOD1P15172 320 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 PVALBP20472 110 aaPredicted RBP13.2□□□□□ -0.3
SHOX-201ENST00000334060 RND3P61587 244 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 HABP2Q14520 560 aaPredicted RBP13.2□□□□□ -0.3
SHOX-201ENST00000334060 DHRS7BQ6IAN0 325 aaPredicted RBP13.2□□□□□ -0.3
SHOX-201ENST00000334060 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 CMTM1Q8IZ96 169 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 MEGF9Q9H1U4 602 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 C9orf170A2RU37 121 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 HLA-AP01891 365 aaKnown RBP13.2□□□□□ -0.3
SHOX-201ENST00000334060 FBP1P09467 338 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 SRD5A1P18405 259 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 CEACAM3P40198 252 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 HES1Q14469 280 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 TMEM187Q14656 261 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 GUCA2BQ16661 112 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 C12orf45Q8N5I9 185 aaPredicted RBP13.2□□□□□ -0.3
SHOX-201ENST00000334060 DMBX1Q8NFW5 382 aa13.2□□□□□ -0.3
SHOX-201ENST00000334060 WDR89Q96FK6 387 aaPredicted RBP13.2□□□□□ -0.3
SHOX-201ENST00000334060 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
SHOX-201ENST00000334060 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 FAM90A9PA6NNJ1 464 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
SHOX-201ENST00000334060 ARPC5O15511 151 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 OR2F2O95006 317 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 RPL35P42766 123 aaKnown RBP13.19□□□□□ -0.3
SHOX-201ENST00000334060 LPAR6P43657 344 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 IER3P46695 156 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 OR2F1Q13607 317 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 ZNF66Q6ZN08 573 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 Q6ZS46 218 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 HSD17B10Q99714 261 aaKnown RBP13.19□□□□□ -0.3
SHOX-201ENST00000334060 MFFQ9GZY8 342 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 TMEM160Q9NX00 188 aa13.19□□□□□ -0.3
SHOX-201ENST00000334060 ADAP1O75689 374 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 G6PCP35575 357 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 THBS3P49746 956 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 PJVKQ0ZLH3 352 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 TMEM128Q5BJH2 165 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 Q6YL49 198 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 CCSO14618 274 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 SFT2D2O95562 160 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 IGKV1-5P01602 117 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 FOLR2P14207 255 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 MRGPRG-AS1Q2M3A8 158 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 C11orf87Q6NUJ2 197 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 FAM71F2Q6NXP2 309 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 ZBTB34Q8NCN2 500 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 TSNAXQ99598 290 aaKnown RBP13.18□□□□□ -0.3
SHOX-201ENST00000334060 CARHSP1Q9Y2V2 147 aaKnown RBP13.18□□□□□ -0.3
SHOX-201ENST00000334060 NSG2Q9Y328 171 aa13.18□□□□□ -0.3
SHOX-201ENST00000334060 DBX1A6NMT0 343 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 CRLF1O75462 422 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 KRASP01116 189 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 ECI1P42126 302 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 SSTP61278 116 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 C10orf91Q5T1B1 145 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 LYZL2Q7Z4W2 148 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 SGPP2Q8IWX5 399 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 Q8N6K4 173 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 ST8SIA2Q92186 375 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 TMEM222Q9H0R3 208 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 WASHC3Q9Y3C0 194 aa13.17□□□□□ -0.3
SHOX-201ENST00000334060 FXYD6-FXYD2A0A087WZ82 144 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 FAM74A7A6NL05 159 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 H0Y980 276 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 FCN1O00602 326 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 AMY1AP04745 511 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 S100PP25815 95 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 SRSF4Q08170 494 aaKnown RBP13.16□□□□□ -0.3
SHOX-201ENST00000334060 MSMO1Q15800 293 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 FAM74A3Q4VXF1 159 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 ATRAIDQ6UW56 229 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 ZDHHC16Q969W1 377 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms