RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 A0A1W2PRV1 198 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 MARCH11A6NNE9 402 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 SCAF4O95104 1147 aaKnown RBP16.41■□□□□ 0.22
SUMO3-201ENST00000332859 ATF4P18848 351 aaPredicted RBP16.41■□□□□ 0.22
SUMO3-201ENST00000332859 NPBWR1P48145 328 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 PDLIM4P50479 330 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 LINC00205P59089 165 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 ATP6V1FQ16864 119 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 SPSB3Q6PJ21 355 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 TMEM133Q9H2Q1 129 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 KIAA1456Q9P272 454 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 FLNCQ14315 2725 aa16.41■□□□□ 0.22
SUMO3-201ENST00000332859 YLPM1P49750 1951 aaKnown RBP16.41■□□□□ 0.22
SUMO3-201ENST00000332859 J3QR06 171 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 FCGR3BO75015 233 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 SLC38A11Q08AI6 406 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 C1orf229Q6ZS94 237 aaPredicted RBP16.4■□□□□ 0.22
SUMO3-201ENST00000332859 OR9G1Q8NH87 305 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 DDB2Q92466 427 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 LOC105371242A0A075B767 164 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 C22orf46C9J442 243 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 SERF2P84101 59 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 AARDQ4LEZ3 155 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 DTD1Q8TEA8 209 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 RBMXL1Q96E39 390 aaKnown RBP16.4■□□□□ 0.22
SUMO3-201ENST00000332859 SLC35B3Q9H1N7 401 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 FBXO7Q9Y3I1 522 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 MYO18BQ8IUG5 2567 aa16.4■□□□□ 0.22
SUMO3-201ENST00000332859 TRAV1-1A0A0B4J248 108 aa16.39■□□□□ 0.21
SUMO3-201ENST00000332859 ZNF833PQ6ZTB9 187 aa16.39■□□□□ 0.21
SUMO3-201ENST00000332859 ABHD12Q8N2K0 398 aa16.39■□□□□ 0.21
SUMO3-201ENST00000332859 OR10X1Q8NGY0 326 aa16.39■□□□□ 0.21
SUMO3-201ENST00000332859 OR4S2Q8NH73 311 aa16.39■□□□□ 0.21
SUMO3-201ENST00000332859 WDR61Q9GZS3 305 aaKnown RBP16.39■□□□□ 0.21
SUMO3-201ENST00000332859 ZNRD1Q9P1U0 126 aa16.39■□□□□ 0.21
SUMO3-201ENST00000332859 KMT2BQ9UMN6 2715 aaPredicted RBP16.39■□□□□ 0.21
SUMO3-201ENST00000332859 TIMM9Q9Y5J7 89 aa16.39■□□□□ 0.21
SUMO3-201ENST00000332859 IGHV2-5P01817 119 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 FAM71F2Q6NXP2 309 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 TNFRSF14Q92956 283 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 OR4C12Q96R67 309 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 BPESC1Q9GZL8 116 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 ONECUT1Q9UBC0 465 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 RBFOX3A6NFN3 312 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 IL3RAP26951 378 aa16.38■□□□□ 0.21
SUMO3-201ENST00000332859 PINX1Q96BK5 328 aaKnown RBP16.38■□□□□ 0.21
SUMO3-201ENST00000332859 RBMXL2O75526 392 aaKnown RBP16.37■□□□□ 0.21
SUMO3-201ENST00000332859 ERVK-16P61578 105 aa16.37■□□□□ 0.21
SUMO3-201ENST00000332859 ZNF383Q8NA42 475 aa16.37■□□□□ 0.21
SUMO3-201ENST00000332859 TMEM186Q96B77 213 aa16.37■□□□□ 0.21
SUMO3-201ENST00000332859 RSG1Q9BU20 258 aa16.37■□□□□ 0.21
SUMO3-201ENST00000332859 TMEM147Q9BVK8 224 aa16.37■□□□□ 0.21
SUMO3-201ENST00000332859 IGHV2-26A0A0B4J1V2 119 aa16.36■□□□□ 0.21
SUMO3-201ENST00000332859 NQO2P16083 231 aa16.36■□□□□ 0.21
SUMO3-201ENST00000332859 OR8G2PQ6IF36 304 aa16.36■□□□□ 0.21
SUMO3-201ENST00000332859 CENPVQ7Z7K6 275 aaPredicted RBP16.36■□□□□ 0.21
SUMO3-201ENST00000332859 OR52E5Q8NH55 327 aa16.36■□□□□ 0.21
SUMO3-201ENST00000332859 SFT2D1Q8WV19 159 aa16.36■□□□□ 0.21
SUMO3-201ENST00000332859 TAF15Q92804 592 aaKnown RBP eCLIP16.36■□□□□ 0.21
SUMO3-201ENST00000332859 A0A1B0GV50 99 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 PMS2P5A8MQ11 134 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CEBPZOSA8MTT3 80 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 M0R1W7 72 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CT45A6P0DMU7 189 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CT45A5P0DMU8 189 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CT45A7P0DMV0 189 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 PLA2G2AP14555 144 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 ZNF137PP52743 207 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 PRRX1P54821 245 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CCL20P78556 96 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 TMEM88Q6PEY1 159 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 OR10P1Q8NGE3 313 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 PIMREGQ9BSJ6 248 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CLEC7AQ9BXN2 247 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 UNKLQ9H9P5 680 aaKnown RBP16.35■□□□□ 0.21
SUMO3-201ENST00000332859 OR9G9P0C7N8 305 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 ATP5J2P56134 94 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 RTL8BQ17RB0 113 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 PDLIM3Q53GG5 364 aaPredicted RBP16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CBLN2Q8IUK8 224 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 OR4A16Q8NH70 328 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 CLDND2Q8NHS1 167 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 MBD3L1Q8WWY6 194 aa16.35■□□□□ 0.21
SUMO3-201ENST00000332859 MALRD1Q5VYJ5 2156 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 DCHS2Q6V1P9 2916 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 UBE2L5PA0A1B0GUS4 154 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 J3QKU1 62 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 NDUFS8O00217 210 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 ENSAO43768 121 aaKnown RBP16.34■□□□□ 0.21
SUMO3-201ENST00000332859 SPCS3P61009 180 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 RPP30P78346 268 aaKnown RBP16.34■□□□□ 0.21
SUMO3-201ENST00000332859 TMEM41BQ5BJD5 291 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 ZNF506Q5JVG8 444 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 FAM168AQ92567 244 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 ZDHHC16Q969W1 377 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 QTRT1Q9BXR0 403 aaKnown RBP16.34■□□□□ 0.21
SUMO3-201ENST00000332859 MRPL20Q9BYC9 149 aaKnown RBP16.34■□□□□ 0.21
SUMO3-201ENST00000332859 RPRMQ9NS64 109 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 SLC35D1Q9NTN3 355 aa16.34■□□□□ 0.21
SUMO3-201ENST00000332859 DOCK11Q5JSL3 2073 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms