RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 S4R3C0 116 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 PQLC2Q6ZP29 291 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 FAM89BQ8N5H3 189 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 TRBV23-1A0A0A0MS06 115 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 RAMP3O60896 148 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 OR5AL1P0C617 328 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 FXYD3Q14802 87 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 C18orf12Q96KH6 178 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
VSTM4-202ENST00000332853 KBTBD11O94819 623 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 MOSP00540 346 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 HNRNPA3P51991 378 aaKnown RBP10.95□□□□□ -0.66
VSTM4-202ENST00000332853 SMUG1Q53HV7 270 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 ZNF343Q6P1L6 599 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 IFT22Q9H7X7 185 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 IGHV3-35A0A0C4DH35 117 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 PGPA6NDG6 321 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 APCSP02743 223 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 FCGR2BP31994 310 aaPredicted RBP10.94□□□□□ -0.66
VSTM4-202ENST00000332853 NHLH1Q02575 133 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 UNQ5815/PRO19632Q6UWF5 114 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 CHODLQ9H9P2 273 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 CCL3L1P16619 93 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 GBGT1Q8N5D6 347 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 STPG3Q8N7X2 389 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 TMEM186Q96B77 213 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 DENND4CQ5VZ89 1909 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 LILRA1O75019 489 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 IGHV3-23P01764 117 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 LOXL3P58215 753 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 RPRMQ9NS64 109 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 ELOA3CA0A087WX78 387 aaPredicted RBP10.94□□□□□ -0.66
VSTM4-202ENST00000332853 F8VVB4 439 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 F8VWA3 439 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 OR4A5Q8NH83 315 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 SMDT1Q9H4I9 107 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 LIPFP07098 398 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 NUBP1P53384 320 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 B3GALT5-AS1P59052 145 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 ZNF146Q15072 292 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 OR4A47Q6IF82 309 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 PCSK4Q6UW60 755 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 KLHDC1Q8N7A1 406 aa10.94□□□□□ -0.66
VSTM4-202ENST00000332853 RTTNQ86VV8 2226 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 TRBV6-7A0A0A0MS04 114 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 KBTBD11-OT1A0A1B0GTJ5 212 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 LYNX1G3V0Z9 82 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 LYNX1P0DP58 116 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 COX6B1P14854 86 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 LCN2P80188 198 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 ZNF497Q6ZNH5 498 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 IGKV3D-15A0A087WSY6 115 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 LY6G6EA0A0G2JKS1 128 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 CRYBB3P26998 211 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 FBLN5Q9UBX5 448 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 U3KQA8 63 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 NCOR1O75376 2440 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 H0YIZ8 118 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 HIST1H1EP10412 219 aaKnown RBP10.93□□□□□ -0.66
VSTM4-202ENST00000332853 EP300Q09472 2414 aaPredicted RBP10.93□□□□□ -0.66
VSTM4-202ENST00000332853 TFPI2P48307 235 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 BIVMQ86UB2 503 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 SPACA3Q8IXA5 215 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 ZNF383Q8NA42 475 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 DNAJC4Q9NNZ3 241 aa10.93□□□□□ -0.66
VSTM4-202ENST00000332853 C17orf100A8MU93 164 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 E9PLN8 166 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 RRHO14718 337 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 IL18BPO95998 194 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 RPL29P47914 159 aaKnown RBP10.92□□□□□ -0.66
VSTM4-202ENST00000332853 PTTG1IPP53801 180 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 ATP5J2P56134 94 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 SNRNP40Q96DI7 357 aaKnown RBP10.92□□□□□ -0.66
VSTM4-202ENST00000332853 NABP2Q9BQ15 211 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 NPCDR1Q9BY65 106 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 MRPL20Q9BYC9 149 aaKnown RBP10.92□□□□□ -0.66
VSTM4-202ENST00000332853 PF4V1P10720 104 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 G0S2P27469 103 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 C1QTNF12Q5T7M4 302 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 GTF3AQ92664 365 aaKnown RBP10.92□□□□□ -0.66
VSTM4-202ENST00000332853 TMEM208Q9BTX3 173 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 CSRP1P21291 193 aaKnown RBP10.92□□□□□ -0.66
VSTM4-202ENST00000332853 IBA57Q5T440 356 aaKnown RBP10.92□□□□□ -0.66
VSTM4-202ENST00000332853 LOC389332A0A1B0GUA5 103 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 TCAPO15273 167 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 CCL19Q99731 98 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 PIMREGQ9BSJ6 248 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 PARLQ9H300 379 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 MFAP2P55001 183 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 TMEM183BQ1AE95 376 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 NUP210Q8TEM1 1887 aaPredicted RBP10.92□□□□□ -0.66
VSTM4-202ENST00000332853 MPDZO75970 2070 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 SPTA1P02549 2419 aa10.92□□□□□ -0.66
VSTM4-202ENST00000332853 SRSF3P84103 164 aaKnown RBP10.91□□□□□ -0.66
VSTM4-202ENST00000332853 RCC1LQ96I51 464 aaKnown RBP10.91□□□□□ -0.66
VSTM4-202ENST00000332853 PLXNB3Q9ULL4 1909 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms