RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 TNFSF13O75888 250 aa18.64■□□□□ 0.57
HOXD1-201ENST00000331462 OR2Z1Q8NG97 314 aa18.64■□□□□ 0.57
HOXD1-201ENST00000331462 S1PR3Q99500 378 aa18.64■□□□□ 0.57
HOXD1-201ENST00000331462 TRAV17A0A0B4J275 112 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 CGAP01215 116 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 ARL14EPLP0DKL9 152 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 UBE2G2P60604 165 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 CLEC12BQ2HXU8 276 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 RPL39P5Q59GN2 51 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 FAM78BQ5VT40 261 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 SSX9Q7RTT3 188 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 GCSAMQ8N6F7 178 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 TMEM37Q8WXS4 190 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 DERL1Q9BUN8 251 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 TCF19Q9Y242 345 aa18.63■□□□□ 0.57
HOXD1-201ENST00000331462 A0A087X0M5 115 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 A0A1B0GX30 115 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 CGB3P0DN86 165 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 CGB7P0DN87 165 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 ZNF134P52741 427 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.62■□□□□ 0.57
HOXD1-201ENST00000331462 OR4S2Q8NH73 311 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 TMEM18Q96B42 140 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 PATZ1Q9HBE1 687 aaKnown RBP18.62■□□□□ 0.57
HOXD1-201ENST00000331462 SLC25A15Q9Y619 301 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 C15orf61A6NNL5 157 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 CCKARP32238 428 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 RAB7AP51149 207 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 CNN1P51911 297 aaKnown RBP18.62■□□□□ 0.57
HOXD1-201ENST00000331462 ZNF600Q6ZNG1 722 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 BHLHA15Q7RTS1 189 aaPredicted RBP18.62■□□□□ 0.57
HOXD1-201ENST00000331462 C1orf159Q96HA4 380 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 SFRP2Q96HF1 295 aa18.62■□□□□ 0.57
HOXD1-201ENST00000331462 AHRRA9YTQ3 701 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 NKX2-8O15522 239 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 CCL11P51671 97 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 MSMPQ1L6U9 139 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 MIC13Q5XKP0 118 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 ZNF114Q8NC26 417 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 STARD4Q96DR4 205 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 NOL4LQ96MY1 436 aaPredicted RBP18.61■□□□□ 0.57
HOXD1-201ENST00000331462 PRO1933Q9H354 126 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 CALYQ9NYX4 217 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 PROCRQ9UNN8 238 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 TRBV20OR9-2A0A075B6H5 130 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 TRAV3A0A0B4J244 114 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 C1QTNF9P0C862 333 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 VKORC1L1Q8N0U8 176 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 TMEM204Q9BSN7 226 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 NPVFQ9HCQ7 196 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 RAB9BQ9NP90 201 aa18.61■□□□□ 0.57
HOXD1-201ENST00000331462 FOXA2Q9Y261 457 aaPredicted RBP18.61■□□□□ 0.57
HOXD1-201ENST00000331462 TTC28Q96AY4 2481 aa18.6■□□□□ 0.57
HOXD1-201ENST00000331462 DKK4Q9UBT3 224 aa18.6■□□□□ 0.57
HOXD1-201ENST00000331462 HCFC1P51610 2035 aa18.6■□□□□ 0.57
HOXD1-201ENST00000331462 LHBP01229 141 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 IGHV3-13P01766 116 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 ABHD12Q8N2K0 398 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 GBGT1Q8N5D6 347 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 OR5T1Q8NG75 326 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 PLPPR2Q96GM1 343 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 OPN3Q9H1Y3 402 aaPredicted RBP18.59■□□□□ 0.57
HOXD1-201ENST00000331462 TMEM14BQ9NUH8 114 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 ELOVL5Q9NYP7 299 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 CELSR3Q9NYQ7 3312 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 MDFIC2A0A1B0GVS7 189 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 FNDC10F2Z333 226 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 UNQ6494/PRO21346Q6UXR6 183 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 C11orf52Q96A22 123 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 FAM234AQ9H0X4 552 aa18.59■□□□□ 0.57
HOXD1-201ENST00000331462 WDFY4Q6ZS81 3184 aa18.58■□□□□ 0.57
HOXD1-201ENST00000331462 A0A0U1RQK1 487 aa18.58■□□□□ 0.56
HOXD1-201ENST00000331462 ZNF320A2RRD8 509 aa18.58■□□□□ 0.56
HOXD1-201ENST00000331462 A8MWP6 167 aa18.58■□□□□ 0.56
HOXD1-201ENST00000331462 IL6RP08887 468 aaPredicted RBP18.58■□□□□ 0.56
HOXD1-201ENST00000331462 BMP5P22003 454 aa18.58■□□□□ 0.56
HOXD1-201ENST00000331462 POU2AF1Q16633 256 aa18.58■□□□□ 0.56
HOXD1-201ENST00000331462 ARSJQ5FYB0 599 aaPredicted RBP18.58■□□□□ 0.56
HOXD1-201ENST00000331462 FRYQ5TBA9 3013 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 TRAV9-1A0A075B6T8 112 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 SLC31A2O15432 143 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 GCHFRP30047 84 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 C17orf58Q2M2W7 97 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 LBHQ53QV2 105 aaPredicted RBP18.57■□□□□ 0.56
HOXD1-201ENST00000331462 C1orf229Q6ZS94 237 aaPredicted RBP18.57■□□□□ 0.56
HOXD1-201ENST00000331462 LRP11Q86VZ4 500 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 ZNF664Q8N3J9 261 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 SLC24A4Q8NFF2 622 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 OR2V2Q96R30 315 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 TRAPPC1Q9Y5R8 145 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 IGHV3OR15-7A0A075B7D8 119 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 SCO2A0A1W2PP80 73 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 NPY1RP25929 384 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 TIMP3P35625 211 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 RPL29P47914 159 aaKnown RBP18.57■□□□□ 0.56
HOXD1-201ENST00000331462 THBS3P49746 956 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 YPEL3P61236 119 aaPredicted RBP18.57■□□□□ 0.56
HOXD1-201ENST00000331462 HSPE1P61604 102 aaKnown RBP18.57■□□□□ 0.56
HOXD1-201ENST00000331462 RHOBP62745 196 aa18.57■□□□□ 0.56
HOXD1-201ENST00000331462 TEPPQ6URK8 271 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms