RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 SSTP61278 116 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 CXorf66Q5JRM2 361 aaPredicted RBP13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HEPN1Q6WQI6 88 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 MISP3Q96FF7 219 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
PDGFB-201ENST00000331163 KLRD1Q13241 179 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF880Q6PDB4 577 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 C1orf174Q8IYL3 243 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 NIPSNAP3BQ9BS92 247 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 E5RGE8 158 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 RAMP3O60896 148 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 PGLYRP1O75594 196 aaPredicted RBP13.14□□□□□ -0.31
PDGFB-201ENST00000331163 IFNA10P01566 189 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
PDGFB-201ENST00000331163 Q6ZPA2 131 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 HEYLQ9NQ87 328 aaPredicted RBP13.14□□□□□ -0.31
PDGFB-201ENST00000331163 GNG13Q9P2W3 67 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 RBFOX3A6NFN3 312 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 IGHV3-48P01763 117 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 STUMQ69YW2 141 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 PNKDQ8N490 385 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 MOB3AQ96BX8 217 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 TUBG2Q9NRH3 451 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 NCBP2LA6PVI3 153 aaKnown RBP13.14□□□□□ -0.31
PDGFB-201ENST00000331163 NAPSAO96009 420 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 TRGC1P0CF51 173 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 ARSJQ5FYB0 599 aaPredicted RBP13.14□□□□□ -0.31
PDGFB-201ENST00000331163 OR4A16Q8NH70 328 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
PDGFB-201ENST00000331163 PACRGQ96M98 296 aaPredicted RBP13.14□□□□□ -0.31
PDGFB-201ENST00000331163 POMT1Q9Y6A1 747 aa13.14□□□□□ -0.31
PDGFB-201ENST00000331163 RND3P61587 244 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 TMEM267Q0VDI3 215 aaPredicted RBP13.13□□□□□ -0.31
PDGFB-201ENST00000331163 ENY2Q9NPA8 101 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 WSB1Q9Y6I7 421 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 ZNF787Q6DD87 383 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 MOB1BQ7L9L4 216 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 FRZBQ92765 325 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 RPEQ96AT9 228 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 GAL3ST2Q9H3Q3 398 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 GAB2Q9UQC2 676 aa13.13□□□□□ -0.31
PDGFB-201ENST00000331163 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 CLEC2AQ6UVW9 174 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 GAFA1Q96PS6 74 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 A6NNC1 897 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 C17orf98A8MV24 154 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 TCAPO15273 167 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 ST8SIA3O43173 380 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 F2RP25116 425 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 LCN15Q6UWW0 184 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 ASCL4Q6XD76 172 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 SDSLQ96GA7 329 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 PLEKHA2Q9HB19 425 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 SEC14L6B5MCN3 397 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 ATP6V0CP27449 155 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 ABHD12Q8N2K0 398 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 DIRC2Q96SL1 478 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 SVEP1Q4LDE5 3571 aa13.12□□□□□ -0.31
PDGFB-201ENST00000331163 ITPR2Q14571 2701 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 S1PR2O95136 353 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 HIST1H1BP16401 226 aaKnown RBP13.11□□□□□ -0.31
PDGFB-201ENST00000331163 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM169BQ8N8A8 192 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 ITPR3Q14573 2671 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 ZANQ9Y493 2812 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FGF8P55075 233 aaPredicted RBP13.11□□□□□ -0.31
PDGFB-201ENST00000331163 NCR3LG1Q68D85 454 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 SLC35E4Q6ICL7 350 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 LIAT1Q6ZQX7 453 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 TUBA4BQ9H853 241 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 GCN1Q92616 2671 aaKnown RBP13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A10PA6NDY2 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A18PA6NE21 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A16PA6NEW6 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A20PA6NIJ5 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A8PA6NJQ4 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A7PA6NKC0 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A22PA8MWA6 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A12PA8MX19 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A5PA8MXJ8 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A23PA8MXZ1 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 CNIH1O95406 144 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 GAPDHP04406 335 aaKnown RBP13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A15PP0C7V4 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 SEC11BP0C7V7 166 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 METTL15P1P0C7V9 234 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A13PP0C7W8 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 FAM90A14PP0C7W9 464 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms