RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 C15orf61A6NNL5 157 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 G3V3Q6 166 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 SMLR1H3BR10 107 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 SLC25A17O43808 307 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 CRYGBP07316 175 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 TMEM11P17152 192 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 CNTFRP26992 372 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 FGL1Q08830 312 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 TEX45Q8NA69 505 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 NPBQ8NG41 125 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 OR4A16Q8NH70 328 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 PPP1R14BQ96C90 147 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 TRAV3A0A0B4J244 114 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 FAM90A26D6RGX4 464 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 NBR2O15453 112 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 SNAPC5O75971 98 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 NDUFA3O95167 84 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 SCGB1D2O95969 90 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 MBPP02686 304 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 FGF2P09038 288 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 HNF1AP20823 631 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 NKX2-1P43699 371 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 OR2B8PP59922 312 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 RAB32Q13637 225 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 MMDQ15546 238 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 DEFB112Q30KQ8 113 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 BCL6BQ8N143 479 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 OR8H1Q8NGG4 311 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 ZFP57Q9NU63 452 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 PRNDQ9UKY0 176 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 FOXA2Q9Y261 457 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 POMT1Q9Y6A1 747 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 NAV3Q8IVL0 2385 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 TRAV14DV4A0A0A6YYC5 116 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 RRHO14718 337 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 MPC2O95563 127 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 C1QBP02746 253 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 PET100P0DJ07 73 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 PSMB6P28072 239 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 S100A10P60903 97 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 HNF4GQ14541 408 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 CXorf66Q5JRM2 361 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 ZNF429Q86V71 674 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 PIFOQ8TCI5 191 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 SSX3Q99909 188 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 TMEM14BQ9NUH8 114 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 KIAA1456Q9P272 454 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 METTL1Q9UBP6 276 aaKnown RBP8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 CACFD1Q9UGQ2 172 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 NSG2Q9Y328 171 aa8.19□□□□□ -1.1
VIPAS39-201ENST00000327028 MDFIC2A0A1B0GVS7 189 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 K7EPK0 472 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 ST8SIA3O43173 380 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 RBMXL2O75526 392 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 LY6G6DO95868 133 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 CD99P14209 185 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 SRP14P37108 136 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 ID3Q02535 119 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 ZFP69Q49AA0 526 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 Q5BKY6 102 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 IL17RELQ6ZVW7 336 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 FAM71E2Q8N5Q1 922 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 QTRT1Q9BXR0 403 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 TPSG1Q9NRR2 321 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 PLSCR3Q9NRY6 295 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 HSPB7Q9UBY9 170 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 SIGLEC9Q9Y336 463 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 F2RL1P55085 397 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 RPL8P62917 257 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 TNFRSF9Q07011 255 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 MRGPRG-AS1Q2M3A8 158 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 OR52E5Q8NH55 327 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 C22orf15Q8WYQ4 148 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 FBXL15Q9H469 300 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 PRDM13Q9H4Q3 707 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 ZNF430Q9H8G1 570 aaPredicted RBP8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 FKBP11Q9NYL4 201 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 TCF19Q9Y242 345 aa8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 RCL1Q9Y2P8 373 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 LSM5Q9Y4Y9 91 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-201ENST00000327028 H3BUX3 64 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 NXPH3O95157 252 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 SLC25A4P12235 298 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 LYL1P12980 280 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 SONP18583 2426 aaKnown RBP8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 PRSS8Q16651 343 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 C5orf64Q2M2E5 130 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 TUSC1Q2TAM9 212 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 PDLIM3Q53GG5 364 aaPredicted RBP8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 MMD2Q8IY49 270 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 SMR3AQ99954 134 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 C1RLQ9NZP8 487 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 MBD2Q9UBB5 411 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 ZNF257Q9Y2Q1 563 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 OR51B2Q9Y5P1 312 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 A6NDX4 124 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 H0YIZ8 118 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 BOLA2-SMG1P6H3BVE0 249 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms