RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 HIST1H2BKO60814 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BJP06899 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BOP23527 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BBP33778 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 PLA2G5P39877 138 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BDP58876 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BCP62807 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST2H2BEQ16778 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.39■□□□□ 0.53
PNKP-201ENST00000322344 OR4A47Q6IF82 309 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 DUX4L9Q6RFH8 374 aaPredicted RBP18.39■□□□□ 0.53
PNKP-201ENST00000322344 C22orf34Q6ZV56 151 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 ZNF383Q8NA42 475 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BHQ93079 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BNQ99877 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 HIST1H2BMQ99879 126 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 MS4A5Q9H3V2 200 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 ENY2Q9NPA8 101 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 TMEM14BQ9NUH8 114 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 C11orf94C9JXX5 98 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 PRRG2O14669 202 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 PDE6DO43924 150 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 GYPAP02724 150 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 TNFRSF1AP19438 455 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 CCKARP32238 428 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 UTF1Q5T230 341 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 C16orf82Q7Z2V1 217 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 ABHD12Q8N2K0 398 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 NPVFQ9HCQ7 196 aa18.39■□□□□ 0.53
PNKP-201ENST00000322344 FRYQ5TBA9 3013 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 DIDO1Q9BTC0 2240 aaKnown RBP18.38■□□□□ 0.53
PNKP-201ENST00000322344 NKX6-3A6NJ46 265 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 C16orf97H3BN30 126 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 SSX8Q7RTT4 187 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 PRSS33Q8NF86 280 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 TMEM170AQ8WVE7 144 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 ANAPC16Q96DE5 110 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 MGST2Q99735 147 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 SSX3Q99909 188 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 TXNDC17Q9BRA2 123 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 GGTLC1Q9BX51 225 aa18.38■□□□□ 0.53
PNKP-201ENST00000322344 ELOA3CA0A087WX78 387 aaPredicted RBP18.37■□□□□ 0.53
PNKP-201ENST00000322344 hADV38S2A0JD32 116 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 YIF1AO95070 293 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 S100PP25815 95 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 FAM216BQ8N7L0 139 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 PYGO2Q9BRQ0 406 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 RPUSD1Q9UJJ7 312 aaKnown RBP18.37■□□□□ 0.53
PNKP-201ENST00000322344 PXMP4Q9Y6I8 212 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 EP300Q09472 2414 aaPredicted RBP18.37■□□□□ 0.53
PNKP-201ENST00000322344 TRAV38-1A0A0B4J264 116 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 H7BYZ3 331 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 NPY1RP25929 384 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 SLC25A48Q6ZT89 311 aaKnown RBP18.37■□□□□ 0.53
PNKP-201ENST00000322344 SLC24A4Q8NFF2 622 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 OR10A7Q8NGE5 316 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 OR5B12Q96R08 314 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 PRNDQ9UKY0 176 aa18.37■□□□□ 0.53
PNKP-201ENST00000322344 A0A0G2JNJ9 132 aa18.36■□□□□ 0.53
PNKP-201ENST00000322344 F6UZH7 168 aa18.36■□□□□ 0.53
PNKP-201ENST00000322344 PFN1P07737 140 aaKnown RBP18.36■□□□□ 0.53
PNKP-201ENST00000322344 DOLPP1Q86YN1 238 aa18.36■□□□□ 0.53
PNKP-201ENST00000322344 NIT2Q9NQR4 276 aa18.36■□□□□ 0.53
PNKP-201ENST00000322344 Q9UFV3 132 aa18.36■□□□□ 0.53
PNKP-201ENST00000322344 LSM4Q9Y4Z0 139 aaKnown RBP18.36■□□□□ 0.53
PNKP-201ENST00000322344 LINC00312Q9Y6C7 94 aa18.36■□□□□ 0.53
PNKP-201ENST00000322344 GCSAMLQ5JQS6 135 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 SRD5A3Q9H8P0 318 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 FNDC10F2Z333 226 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 STAG3L2P0CL84 134 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 STAG3L3P0CL85 134 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 DEFA4P12838 97 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 S100A2P29034 98 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 GNG10P50151 68 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 TDGF1P3P51864 188 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 RTL8BQ17RB0 113 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 TGIF2LYQ8IUE0 185 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 ZCCHC14Q8WYQ9 949 aaKnown RBP18.35■□□□□ 0.53
PNKP-201ENST00000322344 ZNF257Q9Y2Q1 563 aa18.35■□□□□ 0.53
PNKP-201ENST00000322344 TTC28Q96AY4 2481 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 CXorf1O96002 111 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 IL6RP08887 468 aaPredicted RBP18.34■□□□□ 0.53
PNKP-201ENST00000322344 TRGC1P0CF51 173 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 MEF2CQ06413 473 aaPredicted RBP18.34■□□□□ 0.53
PNKP-201ENST00000322344 RAB31Q13636 194 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 FRZBQ92765 325 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 GAL3ST2Q9H3Q3 398 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 PATZ1Q9HBE1 687 aaKnown RBP18.34■□□□□ 0.53
PNKP-201ENST00000322344 GAR1Q9NY12 217 aaKnown RBP18.34■□□□□ 0.53
PNKP-201ENST00000322344 OR51B2Q9Y5P1 312 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 DOCK11Q5JSL3 2073 aa18.34■□□□□ 0.53
PNKP-201ENST00000322344 C17orf100A8MU93 164 aa18.33■□□□□ 0.53
PNKP-201ENST00000322344 NBL1P41271 181 aa18.33■□□□□ 0.53
PNKP-201ENST00000322344 GALR1P47211 349 aa18.33■□□□□ 0.53
PNKP-201ENST00000322344 MIC13Q5XKP0 118 aa18.33■□□□□ 0.53
PNKP-201ENST00000322344 TEPPQ6URK8 271 aa18.33■□□□□ 0.53
PNKP-201ENST00000322344 SPNS3Q6ZMD2 512 aa18.33■□□□□ 0.53
PNKP-201ENST00000322344 WFDC8Q8IUA0 241 aa18.33■□□□□ 0.53
PNKP-201ENST00000322344 CISD2Q8N5K1 135 aaKnown RBP18.33■□□□□ 0.53
PNKP-201ENST00000322344 ABHD5Q8WTS1 349 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms