RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 J3QKU1 62 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 ZNF672Q499Z4 452 aaPredicted RBP11.4□□□□□ -0.58
RFFL-201ENST00000315249 ZNF818PQ6ZRF7 136 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 SLC25A28Q96A46 364 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 TRBV5-7A0A0A0MS05 114 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 PGPA6NDG6 321 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 RUNX1Q01196 453 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 MIC13Q5XKP0 118 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 ZNF841Q6ZN19 808 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 KBTBD11-OT1A0A1B0GTJ5 212 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 DSCR9P59020 149 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
RFFL-201ENST00000315249 RTN4RL2Q86UN3 420 aa11.4□□□□□ -0.58
RFFL-201ENST00000315249 CA7P43166 264 aa11.4□□□□□ -0.59
RFFL-201ENST00000315249 PDE6DO43924 150 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 MOSP00540 346 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 ATP6V0CP27449 155 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 OR13A1Q8NGR1 328 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 CRIM1Q9NZV1 1036 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 LRRK1Q38SD2 2015 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 HMSDA8MTL9 139 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
RFFL-201ENST00000315249 NAT8Q9UHE5 227 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 CTXND1A0A1B0GTU2 59 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 PITX3O75364 302 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 HLA-DQB1P01920 261 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 C17orf82Q86X59 251 aaPredicted RBP11.39□□□□□ -0.59
RFFL-201ENST00000315249 TCF19Q9Y242 345 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 HIST1H1BP16401 226 aaKnown RBP11.39□□□□□ -0.59
RFFL-201ENST00000315249 DEFA6Q01524 100 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 TNFRSF9Q07011 255 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 AANATQ16613 207 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 Q6ZN92 141 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 Q71RC1 249 aaPredicted RBP11.39□□□□□ -0.59
RFFL-201ENST00000315249 SELENOHQ8IZQ5 122 aaKnown RBP11.39□□□□□ -0.59
RFFL-201ENST00000315249 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 C20orf204Q6ZNR8 217 aa11.39□□□□□ -0.59
RFFL-201ENST00000315249 IL18BPO95998 194 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 HEATR5AQ86XA9 2040 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 C12orf77C9JDV5 145 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 CLDN34H7C241 214 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 BSXQ3C1V8 233 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 ERVH48-1M5A8F1 160 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 PIN1P1O15428 100 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 ARFGEF3Q5TH69 2177 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 FOXA2Q9Y261 457 aaPredicted RBP11.38□□□□□ -0.59
RFFL-201ENST00000315249 KBTBD11O94819 623 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 TMEM97Q5BJF2 176 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 MRPL20Q9BYC9 149 aaKnown RBP11.38□□□□□ -0.59
RFFL-201ENST00000315249 MED13LQ71F56 2210 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 TMEM262E9PQX1 116 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 OR11H7Q8NGC8 314 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 TGOLN2O43493 480 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 DLX6P56179 175 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 ZNF880Q6PDB4 577 aa11.38□□□□□ -0.59
RFFL-201ENST00000315249 TSPOP30536 169 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 EFNA4P52798 201 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 EIF4E3Q8N5X7 224 aaKnown RBP11.37□□□□□ -0.59
RFFL-201ENST00000315249 SGK494Q96LW2 274 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 KIAA1671Q9BY89 1806 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 MAS1LP35410 378 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 FAM74A4Q5TZK3 123 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 Q6ZS92 163 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 SLC16A13Q7RTY0 426 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 MAPK1IP1LQ8NDC0 245 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 ANGPTL6Q8NI99 470 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 SEC11CQ9BY50 192 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 MSGN1A6NI15 193 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 HKR1P10072 659 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 FOXG1P55316 489 aaPredicted RBP11.37□□□□□ -0.59
RFFL-201ENST00000315249 CX3CL1P78423 397 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 ZNF146Q15072 292 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 ST6GAL2Q96JF0 529 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 A0A0G2JK05 382 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 UQCC3Q6UW78 93 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 PLSCR4Q9NRQ2 329 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 PTBP3O95758 552 aaKnown RBP11.37□□□□□ -0.59
RFFL-201ENST00000315249 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 CD69Q07108 199 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 RNF212Q495C1 297 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 GGNQ86UU5 652 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 FAM53AQ6NSI3 398 aaPredicted RBP11.37□□□□□ -0.59
RFFL-201ENST00000315249 HSPB7Q9UBY9 170 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 OPN4Q9UHM6 478 aa11.37□□□□□ -0.59
RFFL-201ENST00000315249 TEX50A0A1B0GTY4 177 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 LY6HO94772 140 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 MEF2CQ06413 473 aaPredicted RBP11.36□□□□□ -0.59
RFFL-201ENST00000315249 FAM24BQ8N5W8 94 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 FGFBP3Q8TAT2 258 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 ADAM11O75078 769 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms