RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 HRASP01112 189 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGKV1-39P01597 117 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGKV1D-39P04432 117 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 MDKP21741 143 aaPredicted RBP8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 GALR1P47211 349 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 RPL23P62829 140 aaKnown RBP8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 TGFBR3Q03167 851 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 TPTE2P1Q5T6R2 138 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 CFAP161Q6P656 301 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 HS3ST6Q96QI5 342 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 GP6Q9HCN6 339 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 MTCH1Q9NZJ7 389 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 CACNG5Q9UF02 275 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 WIPI2Q9Y4P8 454 aa8.65□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGHV2OR16-5A0A0B4J2B6 119 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 FAM90A26D6RGX4 464 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 H7BYZ3 331 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 K7ERU9 68 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 CD55P08174 381 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 TPPP2P59282 170 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 BATFQ16520 125 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 FBLN7Q53RD9 439 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 MRPL21Q7Z2W9 205 aaKnown RBP8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 ZDHHC23Q8IYP9 409 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR10V1Q8NGI7 309 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 TAF15Q92804 592 aaKnown RBP eCLIP8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 LHX4Q969G2 390 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 RPUSD4Q96CM3 377 aaKnown RBP8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR4C12Q96R67 309 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 RNF2Q99496 336 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 C1QTNF9BB2RNN3 333 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 DEGS1O15121 323 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 C1QTNF9P0C862 333 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 IAPPP10997 89 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 GZMHP20718 246 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 ESPL1Q14674 2120 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 TOMM20LQ6UXN7 152 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 SNRNP40Q96DI7 357 aaKnown RBP8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 PROCRQ9UNN8 238 aa8.64□□□□□ -1.03
APOBEC3F-201ENST00000308521 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGKV1-5P01602 117 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 TFPI2P48307 235 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 PSMB3P49720 205 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 GPM6AP51674 278 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 RHOGP84095 191 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 OCIAD2Q56VL3 154 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 C1orf185Q5T7R7 199 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR5A2Q8NGI9 324 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR51H1Q8NH63 302 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 APOBEC3DQ96AK3 386 aaPredicted RBP8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 MANBALQ9NQG1 85 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 PLSCR4Q9NRQ2 329 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 ERRFI1Q9UJM3 462 aaPredicted RBP8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 LAMTOR2Q9Y2Q5 125 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 POLEQ07864 2286 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 CGAP01215 116 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 ALKBH6Q3KRA9 238 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 KCNIP4Q6PIL6 250 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 C20orf204Q6ZNR8 217 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 TCF24Q7RTU0 167 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 C17orf78Q8N4C9 275 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 RPP25LQ8N5L8 163 aaKnown RBP8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 SDSLQ96GA7 329 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR51I2Q9H344 312 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 MRPL27Q9P0M9 148 aaKnown RBP8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 IL36RNQ9UBH0 155 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 FZR1Q9UM11 496 aa8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 MRPS16Q9Y3D3 137 aaKnown RBP8.63□□□□□ -1.03
APOBEC3F-201ENST00000308521 PLCE1Q9P212 2302 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 DIDO1Q9BTC0 2240 aaKnown RBP8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 COL12A1Q99715 3063 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 CTXND1A0A1B0GTU2 59 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 MBD3L4A6NDZ8 208 aaPredicted RBP8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 MBD3L3A6NE82 208 aaPredicted RBP8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 MBD3L5A6NJ08 208 aaPredicted RBP8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 VENTXO95231 258 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGLV2-14P01704 120 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 SLC38A11Q08AI6 406 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 TMEM95Q3KNT9 176 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 ZNF474Q6S9Z5 364 aaPredicted RBP8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 TMEM14EPQ6UXP3 125 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 WDR31Q8NA23 367 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 MBD3L2Q8NHZ7 208 aaPredicted RBP8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 BET1LQ9NYM9 111 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 TNFSF4P23510 183 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 TMPRSS3P57727 454 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 IZUMO4Q1ZYL8 232 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 DOLPP1Q86YN1 238 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 PNKDQ8N490 385 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 STPG4Q8N801 248 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR2T10Q8NGZ9 312 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR5B3Q8NH48 314 aa8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 PARLQ9H300 379 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms