RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 NAPSAO96009 420 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 LIPFP07098 398 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF324BQ6AW86 544 aaPredicted RBP9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR8I2Q8N0Y5 310 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 LRTM2Q8N967 370 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 P2RX4Q99571 388 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 PAXXQ9BUH6 204 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 CORTO00230 105 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 LILRA1O75019 489 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 NDUFB4O95168 129 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 TCL1AP56279 114 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 SRSF7Q16629 238 aaKnown RBP eCLIP9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZCCHC24Q8N2G6 241 aaKnown RBP9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 RAXQ9Y2V3 346 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 PHOX2AO14813 284 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 RND2P52198 227 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 TPPP2P59282 170 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 LRP11Q86VZ4 500 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 RANP62826 216 aaKnown RBP9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 MEF2CQ06413 473 aaPredicted RBP9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 PQLC2Q6ZP29 291 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 ID3Q02535 119 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 NCMAPQ5T1S8 102 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 Q6ZS92 163 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 BIVMQ86UB2 503 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 FAM222BQ8WU58 562 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 RCC1LQ96I51 464 aaKnown RBP9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF581Q9P0T4 197 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 SEC14L6B5MCN3 397 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 YPEL1O60688 119 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 SNRPCP09234 159 aaKnown RBP9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 RD3LP0DJH9 198 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 CAMPP49913 170 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 GAMTQ14353 236 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 ECSCRQ19T08 205 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 WDR73Q6P4I2 378 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 OSR1Q8TAX0 266 aaPredicted RBP9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 YPEL2Q96QA6 119 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF430Q9H8G1 570 aaPredicted RBP9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 LINC00312Q9Y6C7 94 aa9.58□□□□□ -0.88
PCDHGC3-201ENST00000308177 PNKDQ8N490 385 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 SLC25A15Q9Y619 301 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 USF3Q68DE3 2245 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 LOC105371242A0A075B767 164 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 SRRM5B3KS81 715 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 PSPNO60542 156 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 LRRC75BQ2VPJ9 315 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 CLEC2AQ6UVW9 174 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 WDFY1Q8IWB7 410 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 ATP5IP56385 69 aaPredicted RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 KRTDAPP60985 99 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 MBNL2Q5VZF2 373 aaKnown RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 OR4A47Q6IF82 309 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 COLCA1Q6ZS62 124 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 C16orf82Q7Z2V1 217 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 WDR31Q8NA23 367 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 OR1L6Q8NGR2 347 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 SNRNP40Q96DI7 357 aaKnown RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 GRAMD2BQ96HH9 432 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 TNFRSF19Q9NS68 423 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF106Q9H2Y7 1883 aaKnown RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 MBD3L4A6NDZ8 208 aaPredicted RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 MBD3L3A6NE82 208 aaPredicted RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 MBD3L5A6NJ08 208 aaPredicted RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 MORN2Q502X0 79 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 ASCL4Q6XD76 172 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 OR5AU1Q8NGC0 362 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 MBD3L2Q8NHZ7 208 aaPredicted RBP9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 VKORC1Q9BQB6 163 aa9.57□□□□□ -0.88
PCDHGC3-201ENST00000308177 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 CA2P00918 260 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 PMCHP20382 165 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 SGMS2Q8NHU3 365 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 RNASE6Q93091 150 aaKnown RBP9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 GOSR1O95249 250 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 PLAUP00749 431 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 FAM106CPP0CH98 169 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 SLC16A13Q7RTY0 426 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 TRBV23-1A0A0A0MS06 115 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 IGHV1-46P01743 117 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 CCL3L1P16619 93 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 S100A4P26447 101 aaKnown RBP9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 OR4D5Q8NGN0 318 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 C1orf147Q96MC9 270 aaPredicted RBP9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 NOL4LQ96MY1 436 aaPredicted RBP9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 NPCDR1Q9BY65 106 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 FUT9Q9Y231 359 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 ARL14EPLP0DKL9 152 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 COL8A1P27658 744 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 COMPP49747 757 aaPredicted RBP9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 COX19Q49B96 90 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 SSX7Q7RTT5 188 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 DNAJC4Q9NNZ3 241 aa9.56□□□□□ -0.88
PCDHGC3-201ENST00000308177 DOCK10Q96BY6 2186 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 MED13LQ71F56 2210 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 RAMP3O60896 148 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms