RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 BSCL2Q96G97 398 aaPredicted RBP5.62□□□□□ -1.51
PTCD2-201ENST00000308077 RITA1Q96K30 269 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 RHOVQ96L33 236 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 QTRT1Q9BXR0 403 aaKnown RBP5.62□□□□□ -1.51
PTCD2-201ENST00000308077 ZFP57Q9NU63 452 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 HSPB7Q9UBY9 170 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 AMMECR1Q9Y4X0 333 aaPredicted RBP5.62□□□□□ -1.51
PTCD2-201ENST00000308077 TGP01266 2768 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 WNK2Q9Y3S1 2297 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 CR1P17927 2039 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 RPS10-NUDT3A0A1W2PQS6 291 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 FAM24AA6NFZ4 105 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 FAM90A9PA6NNJ1 464 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 H7C2Y5 167 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 BCL2L11O43521 198 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 SNAPC5O75971 98 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 IGLV2-23P01705 113 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 GAPDHP04406 335 aaKnown RBP5.61□□□□□ -1.51
PTCD2-201ENST00000308077 SAA1P0DJI8 122 aaPredicted RBP5.61□□□□□ -1.51
PTCD2-201ENST00000308077 RRASP10301 218 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 IAPPP10997 89 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 USF1P22415 310 aaPredicted RBP5.61□□□□□ -1.51
PTCD2-201ENST00000308077 HTR1DP28221 377 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 RPL12P30050 165 aaKnown RBP5.61□□□□□ -1.51
PTCD2-201ENST00000308077 P2RY1P47900 373 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 ERVK-16P61578 105 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 TNFRSF9Q07011 255 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 AARDQ4LEZ3 155 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 CLEC9AQ6UXN8 241 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 PDPNQ86YL7 162 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 DYNAPQ8N1N2 210 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 LHX4Q969G2 390 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 RPEQ96AT9 228 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 HARBI1Q96MB7 349 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 RBKSQ9H477 322 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.61□□□□□ -1.51
PTCD2-201ENST00000308077 WASHC3Q9Y3C0 194 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 HILPDAQ9Y5L2 63 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 SVEP1Q4LDE5 3571 aa5.61□□□□□ -1.51
PTCD2-201ENST00000308077 IGSF23A1L1A6 192 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 LEUTXA8MZ59 168 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 FAM90A26D6RGX4 464 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 WRBO00258 174 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 SHOXO15266 292 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 SYNGR2O43760 224 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 HRASP01112 189 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 UBE2KP61086 200 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 FBLN7Q53RD9 439 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 SPINK9Q5DT21 86 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 Q5PR19 223 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 MOB3BQ86TA1 216 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 PUSL1Q8N0Z8 303 aaKnown RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 OR4C13Q8NGP0 309 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 OSR1Q8TAX0 266 aaPredicted RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 CFHR4Q92496 578 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 FLYWCH2Q96CP2 140 aaKnown RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 MBD6Q96DN6 1003 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 C1orf159Q96HA4 380 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 AJUBAQ96IF1 538 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 CITED4Q96RK1 184 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 CYTL1Q9NRR1 136 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 LYRM2Q9NU23 88 aaPredicted RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 DPM3Q9P2X0 92 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 CSMD1Q96PZ7 3565 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 C15orf61A6NNL5 157 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 H3BP45 60 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 TIMM23O14925 209 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 TXNL1O43396 289 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 GPR137BO60478 399 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 RBMXL2O75526 392 aaKnown RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 MSMBP08118 114 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 MYOD1P15172 320 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 CNTFRP26992 372 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 MC5RP33032 325 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 NUP62P37198 522 aaPredicted RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 UBE2E1P51965 193 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 ARHGDIBP52566 201 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 RPS16P62249 146 aaKnown RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 NHLH2Q02577 135 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 ALKAL2Q6UX46 152 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 ZNF767PQ75MW2 155 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 OR2C3Q8N628 320 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 MAPK1IP1LQ8NDC0 245 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 OR4A16Q8NH70 328 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 ARPC5LQ9BPX5 153 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 MS4A7Q9GZW8 240 aaPredicted RBP5.6□□□□□ -1.51
PTCD2-201ENST00000308077 FBXL17Q9UF56 701 aa5.6□□□□□ -1.51
PTCD2-201ENST00000308077 CENPVL3A0A0U1RRI6 287 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 KANTRA0A1W2PQU2 76 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 RNF223E7ERA6 249 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 UPK2O00526 184 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 KBTBD11O94819 623 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 PVALBP20472 110 aaPredicted RBP5.59□□□□□ -1.51
PTCD2-201ENST00000308077 C4BPBP20851 252 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 RAB13P51153 203 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 CAV2P51636 162 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 VAMP2P63027 116 aa5.59□□□□□ -1.51
PTCD2-201ENST00000308077 EWSR1Q01844 656 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTCD2-201ENST00000308077 HABP2Q14520 560 aaPredicted RBP5.59□□□□□ -1.51
PTCD2-201ENST00000308077 MRGPRG-AS1Q2M3A8 158 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms