RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CXorf66Q5JRM2 361 aaPredicted RBP11.57□□□□□ -0.56
TRIM56-201ENST00000306085 TRGV2A0A075B6R0 118 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 PRSS53Q2L4Q9 553 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 RTN4RL2Q86UN3 420 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 CEACAM5P06731 702 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 DOCK4Q8N1I0 1966 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 IGHV3-64A0A075B6Q5 118 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 TXNDC17Q9BRA2 123 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 SEMA5BQ9P283 1151 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 MUC4Q99102 2169 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 LGALS1P09382 135 aaKnown RBP11.57□□□□□ -0.56
TRIM56-201ENST00000306085 SDF2L1Q9HCN8 221 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 TANC2Q9HCD6 1990 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 J3QT63 122 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 CENPVQ7Z7K6 275 aaPredicted RBP11.56□□□□□ -0.56
TRIM56-201ENST00000306085 CHST5Q9GZS9 411 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 CDC42EP2O14613 210 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 ATXN8Q156A1 80 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 TRAV24A0A0B4J272 114 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 C5orf30Q96GV9 206 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 TSPAN7P41732 249 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 TAF15Q92804 592 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRIM56-201ENST00000306085 JMJD8Q96S16 334 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 CXCL2P19875 107 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 DCAF12L2Q5VW00 463 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 IGHV3-23P01764 117 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 NPPCP23582 126 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 OCIAD2Q56VL3 154 aa11.56□□□□□ -0.56
TRIM56-201ENST00000306085 FAM219BQ5XKK7 198 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 LINC00305Q7Z4B0 112 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 CT55Q8WUE5 264 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 MS4A5Q9H3V2 200 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 A8MWV9 139 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 A0A1B0GTL3 188 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 PQLC2LA1A4F0 135 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 G6PC2Q9NQR9 355 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 M0R2P5 195 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 LSM6P62312 80 aaKnown RBP11.55□□□□□ -0.56
TRIM56-201ENST00000306085 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 PIMREGQ9BSJ6 248 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 PPIAL4EA0A075B759 164 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 C16orf97H3BN30 126 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 PPIAL4FP0DN26 164 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 LINC01587Q99440 93 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 PPIAL4AQ9Y536 164 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 COL11A1P12107 1806 aaPredicted RBP11.55□□□□□ -0.56
TRIM56-201ENST00000306085 ATAD5Q96QE3 1844 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 HBDP02042 147 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 TMEM86BQ8N661 226 aa11.55□□□□□ -0.56
TRIM56-201ENST00000306085 CLDND2Q8NHS1 167 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 CRYBG1Q9Y4K1 1723 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 NAPSAO96009 420 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 C8orf88P0DMB2 117 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 PEAR1Q5VY43 1037 aaPredicted RBP11.54□□□□□ -0.56
TRIM56-201ENST00000306085 TMEM222Q9H0R3 208 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 FUT5Q11128 374 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 TOMM40O96008 361 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 SSC4DQ8WTU2 575 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 CXCL16Q9H2A7 254 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 JPT2Q9H910 190 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 TRAV30A0A087WSZ9 112 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 MOSP00540 346 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 TLNRD1Q9H1K6 362 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 NKX2-2O95096 273 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 CD8AP01732 235 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 COX6B1P14854 86 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 PRTN3P24158 256 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 UNQ9370/PRO34162Q6UXP9 181 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 ERVH48-1M5A8F1 160 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 IGHV3OR16-10A0A075B7F0 116 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 LAMB2P55268 1798 aa11.54□□□□□ -0.56
TRIM56-201ENST00000306085 LIPT2A6NK58 231 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 BGLAPP02818 100 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 UCN2Q96RP3 112 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 TGIF1Q15583 401 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 APOBEC4Q8WW27 367 aaKnown RBP11.53□□□□□ -0.56
TRIM56-201ENST00000306085 LINC00587B1AMM8 73 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 KLK8O60259 260 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 CBLN3Q6UW01 205 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 LEAP2Q969E1 77 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 F8WEM9 126 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 ZNF658BQ4V348 819 aaPredicted RBP11.53□□□□□ -0.56
TRIM56-201ENST00000306085 PDFQ9HBH1 243 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 ARAP2Q8WZ64 1704 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 MARCH11A6NNE9 402 aa11.53□□□□□ -0.56
TRIM56-201ENST00000306085 HOXD4P09016 255 aaPredicted RBP11.53□□□□□ -0.56
TRIM56-201ENST00000306085 TRIP6Q15654 476 aaKnown RBP11.53□□□□□ -0.56
TRIM56-201ENST00000306085 DMKNQ6E0U4 476 aaPredicted RBP11.53□□□□□ -0.56
TRIM56-201ENST00000306085 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.56
TRIM56-201ENST00000306085 PTP4A3O75365 173 aa11.52□□□□□ -0.56
TRIM56-201ENST00000306085 NR2C2APQ86WQ0 139 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms