RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 OR4A16Q8NH70 328 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 SCGB1C1Q8TD33 95 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 TMEM170AQ8WVE7 144 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 TAF15Q92804 592 aaKnown RBP eCLIP5.35□□□□□ -1.55
USP47-201ENST00000305481 H2AFB1P0C5Y9 115 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 MYOD1P15172 320 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 PPT1P50897 306 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 GNB2P62879 340 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 HNF4GQ14541 408 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 VWC2Q2TAL6 325 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 TMEM155Q4W5P6 130 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 AKR1C8PQ5T2L2 129 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 ZNF841Q6ZN19 808 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 OR52E5Q8NH55 327 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 CIB3Q96Q77 187 aaPredicted RBP5.34□□□□□ -1.55
USP47-201ENST00000305481 PSMG3Q9BT73 122 aaPredicted RBP5.34□□□□□ -1.55
USP47-201ENST00000305481 EIF5A2Q9GZV4 153 aaKnown RBP5.34□□□□□ -1.55
USP47-201ENST00000305481 SPTBN1Q01082 2364 aaKnown RBP5.34□□□□□ -1.55
USP47-201ENST00000305481 A0A1B0GW64 132 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 LY6HO94772 140 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 ERVK-16P61578 105 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 POU2AF1Q16633 256 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 DPPA3Q6W0C5 159 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 CENPVQ7Z7K6 275 aaPredicted RBP5.34□□□□□ -1.55
USP47-201ENST00000305481 ZNF429Q86V71 674 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 ZNF596Q8TC21 504 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 SFT2D1Q8WV19 159 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 ADTRPQ96IZ2 230 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 TMEM14BQ9NUH8 114 aa5.34□□□□□ -1.55
USP47-201ENST00000305481 ASH1LQ9NR48 2969 aaKnown RBP5.34□□□□□ -1.56
USP47-201ENST00000305481 C15orf61A6NNL5 157 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 RRHO14718 337 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 IGKV1D-33P01593 117 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 IGKV1-33P01594 117 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 IGHV2-70P01814 119 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 PEA15Q15121 130 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 Q8N7P7 452 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 OR10P1Q8NGE3 313 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 ST6GALNAC6Q969X2 333 aa5.34□□□□□ -1.56
USP47-201ENST00000305481 MRPL20Q9BYC9 149 aaKnown RBP5.34□□□□□ -1.56
USP47-201ENST00000305481 A0A087X0M5 115 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 TRAV1-1A0A0B4J248 108 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 A0A1B0GX30 115 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 A0A1W2PPR1 153 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 PRSS46E5RG02 174 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 EIF3GO75821 320 aaKnown RBP eCLIP5.33□□□□□ -1.56
USP47-201ENST00000305481 RPL35P42766 123 aaKnown RBP5.33□□□□□ -1.56
USP47-201ENST00000305481 UQCRFS1P47985 274 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 DLX1P56177 255 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 SERF2P84101 59 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 TLE4Q04727 773 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 TMEM88Q6PEY1 159 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 ABHD12Q8N2K0 398 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 LFNGQ8NES3 379 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 OR13D1Q8NGV5 346 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 C12orf57Q99622 126 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 TMEM147Q9BVK8 224 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 TCF19Q9Y242 345 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 FOXA2Q9Y261 457 aaPredicted RBP5.33□□□□□ -1.56
USP47-201ENST00000305481 MALRD1Q5VYJ5 2156 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 RBFOX3A6NFN3 312 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 J3QR06 171 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 SOD3P08294 240 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 IGHV1-8P0DP01 117 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 REG1BP48304 166 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 PPOXP50336 477 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 ATP6V1FQ16864 119 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 C11orf71Q6IPW1 123 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 ACSM6Q6P461 480 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 CBLN2Q8IUK8 224 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 OR5AN1Q8NGI8 311 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 PINX1Q96BK5 328 aaKnown RBP5.33□□□□□ -1.56
USP47-201ENST00000305481 RCC1LQ96I51 464 aaKnown RBP5.33□□□□□ -1.56
USP47-201ENST00000305481 SLC35D1Q9NTN3 355 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 KIAA1456Q9P272 454 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 TNCP24821 2201 aa5.33□□□□□ -1.56
USP47-201ENST00000305481 TMEM238LA0A1B0GVL6 79 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 BTBD17A6NE02 478 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 H0YJW9 148 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 SNAPINO95295 136 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 FSTL3O95633 263 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 RAB2AP61019 212 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 HAGHQ16775 308 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 AVPI1Q5T686 147 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 ETV3LQ6ZN32 361 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 RPP25LQ8N5L8 163 aaKnown RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 C8orf31Q8N9H6 132 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 CLDND2Q8NHS1 167 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 MBD3L1Q8WWY6 194 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 HEYLQ9NQ87 328 aaPredicted RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 TIMM9Q9Y5J7 89 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 HRASP01112 189 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 FBP1P09467 338 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 ELLP55199 621 aaPredicted RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 HSPE1P61604 102 aaKnown RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 ICAM4Q14773 271 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 TMEM41BQ5BJD5 291 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 LINC00311Q8N616 119 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 CLRN3Q8NCR9 226 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 C1orf159Q96HA4 380 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms