RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 A0A0G2JNJ9 132 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 H3BQ15 152 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 MLNRO43193 412 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 CD99P14209 185 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 Q9UFV3 132 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 UBR3Q6ZT12 1888 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 MARCH11A6NNE9 402 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 GLRXP35754 106 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 WDR82Q6UXN9 313 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 TP53RKQ96S44 253 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 DNAJC4Q9NNZ3 241 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 QSER1Q2KHR3 1735 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 TUBD1Q9UJT1 453 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 C17orf98A8MV24 154 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 GCGP01275 180 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 MALP21145 153 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 VGLL1Q99990 258 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 TNFRSF18Q9Y5U5 241 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 GATA4P43694 442 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 LCNL1Q6ZST4 164 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 TEX29Q8N6K0 151 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 STPG3Q8N7X2 389 aa6.58□□□□□ -1.36
SCN9A-201ENST00000303354 PSCAO43653 123 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 TMEM186Q96B77 213 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 G6PC2Q9NQR9 355 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 PLSCR2Q9NRY7 297 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 DNM1P46Q6ZS02 220 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
SCN9A-201ENST00000303354 TMEM160Q9NX00 188 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 ALX3O95076 343 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 GZMMP51124 257 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 ZNF729A6NN14 1252 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-201ENST00000303354 SIAH2O43255 324 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 SCGB1A1P11684 91 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 TFF3Q07654 80 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 ASPHD2Q6ICH7 369 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 JKAMPQ9P055 326 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 THSD7AQ9UPZ6 1657 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 CD7P09564 240 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 AQP3Q92482 292 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 DIRC3C9JPN6 131 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 GCM2O75603 506 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-201ENST00000303354 HSPE1P61604 102 aaKnown RBP6.57□□□□□ -1.36
SCN9A-201ENST00000303354 SPSB4Q96A44 273 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 TRBV20OR9-2A0A075B6H5 130 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 ZNF708P17019 499 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 NUTF2P61970 127 aaKnown RBP6.57□□□□□ -1.36
SCN9A-201ENST00000303354 GNG5P63218 68 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 ZBTB34Q8NCN2 500 aa6.57□□□□□ -1.36
SCN9A-201ENST00000303354 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
SCN9A-201ENST00000303354 ZNF672Q499Z4 452 aaPredicted RBP6.56□□□□□ -1.36
SCN9A-201ENST00000303354 Q5PR19 223 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 JPT1Q9UK76 154 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TRGV4A0A0C4DH28 118 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 COL8A2P25067 703 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 LSM10Q969L4 123 aaKnown RBP6.56□□□□□ -1.36
SCN9A-201ENST00000303354 NABP2Q9BQ15 211 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 A0A087WV48 116 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 LIMS1P48059 325 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 PSG9Q00887 426 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TMEM170BQ5T4T1 132 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 IGFBPL1Q8WX77 278 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 SLC25A28Q96A46 364 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TMEM101Q96IK0 257 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 PEMTQ9UBM1 199 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TCF19Q9Y242 345 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 FAM166AQ6J272 317 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TMEM252Q8N6L7 170 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 SSC4DQ8WTU2 575 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 LINC00477Q96M19 166 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 MYO16Q9Y6X6 1858 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TRAV20A0A0B4J274 112 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 ZNF385CQ66K41 422 aaPredicted RBP6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TEX45Q8NA69 505 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 TDRD6O60522 2096 aaKnown RBP6.56□□□□□ -1.36
SCN9A-201ENST00000303354 RREB1Q92766 1687 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 C12orf77C9JDV5 145 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 FAM209BQ5JX69 171 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 BIVMQ86UB2 503 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 RPRMLQ8N4K4 120 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 PLPPR1Q8TBJ4 325 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 CGAP01215 116 aa6.56□□□□□ -1.36
SCN9A-201ENST00000303354 ISLRO14498 428 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 SELENOTP62341 195 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 CYP2G1PQ6ZSU1 146 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 PDE6DO43924 150 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 P2RY4P51582 365 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 OR9G4Q8NGQ1 327 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 CYB561D1Q8N8Q1 229 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 FOXD3Q9UJU5 478 aaPredicted RBP6.55□□□□□ -1.36
SCN9A-201ENST00000303354 TIMM23O14925 209 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 ERGP11308 486 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 LINC00205P59089 165 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 AICDAQ9GZX7 198 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 KIAA1217Q5T5P2 1943 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 CROCCQ5TZA2 2017 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 CTXND1A0A1B0GTU2 59 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 H0Y980 276 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 H3BUX3 64 aa6.55□□□□□ -1.36
SCN9A-201ENST00000303354 EVI2AP22794 236 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms