RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PROP1O75360 226 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 DFFBO76075 338 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 IGHV1-46P01743 117 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 TNFAIP6P98066 277 aaPredicted RBP18.18■□□□□ 0.5
TPM4-201ENST00000300933 PRSS8Q16651 343 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 RAB24Q969Q5 203 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 AGMATQ9BSE5 352 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 ELOVL1Q9BW60 279 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 TRAV1-1A0A0B4J248 108 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 RBMXL2O75526 392 aaKnown RBP18.17■□□□□ 0.5
TPM4-201ENST00000300933 ZNF134P52741 427 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 NCR3LG1Q68D85 454 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 RPUSD4Q96CM3 377 aaKnown RBP18.17■□□□□ 0.5
TPM4-201ENST00000300933 PMS2P11Q13670 270 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 RPL39P5Q59GN2 51 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 OR8G2PQ6IF36 304 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 HAPLN4Q86UW8 402 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 PCGF1Q9BSM1 259 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 CLN8Q9UBY8 286 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 DYSFO75923 2080 aa18.17■□□□□ 0.5
TPM4-201ENST00000300933 IGLV3-9A0A075B6K5 115 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 A0A1W2PPQ1 181 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 ZDHHC16Q969W1 377 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 DPRXA6NFQ7 191 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 PPP5D1E7EU14 171 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 C16orf97H3BN30 126 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 MZT1Q08AG7 82 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 EIF4EBP1Q13541 118 aaPredicted RBP18.16■□□□□ 0.5
TPM4-201ENST00000300933 VKORC1L1Q8N0U8 176 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 CCL13Q99616 98 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 VAX2Q9UIW0 290 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 DCHS2Q6V1P9 2916 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 TNFRSF9Q07011 255 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 FAM90A1Q86YD7 464 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 MRPL41Q8IXM3 137 aaKnown RBP18.16■□□□□ 0.5
TPM4-201ENST00000300933 RAB40CQ96S21 281 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 CBLN4Q9NTU7 201 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 FUT9Q9Y231 359 aa18.16■□□□□ 0.5
TPM4-201ENST00000300933 GYPAP02724 150 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 PFN1P07737 140 aaKnown RBP18.15■□□□□ 0.5
TPM4-201ENST00000300933 HCFC1P51610 2035 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 TMEM68Q96MH6 324 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 SNHG12Q9BXW3 62 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 CTDSP1Q9GZU7 261 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 LHBP01229 141 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 GALR1P47211 349 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 BSPH1Q075Z2 132 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 C1orf229Q6ZS94 237 aaPredicted RBP18.15■□□□□ 0.5
TPM4-201ENST00000300933 C1orf174Q8IYL3 243 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 FAM216BQ8N7L0 139 aa18.15■□□□□ 0.5
TPM4-201ENST00000300933 RNF212BA8MTL3 300 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 SELENOVP59797 346 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 BEND2Q8NDZ0 799 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 MGST3O14880 152 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 THBDP07204 575 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 SLC25A6P12236 298 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 GPR12P47775 334 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 GNB2P62879 340 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 PAX5Q02548 391 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 MORN2Q502X0 79 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 HIPK2Q9H2X6 1198 aa18.14■□□□□ 0.49
TPM4-201ENST00000300933 ARFGEF3Q5TH69 2177 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 MAP1LC3B2A6NCE7 125 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 FCGR3BO75015 233 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 GCGP01275 180 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 RAB4BP61018 213 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 TMEM241Q24JQ0 296 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 OR5T1Q8NG75 326 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 MAP1LC3BQ9GZQ8 125 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 NAT8Q9UHE5 227 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 H7BYZ3 331 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 CATR1Q13166 79 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 BSXQ3C1V8 233 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 OR51G1Q8NGK1 321 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 OR5B12Q96R08 314 aa18.13■□□□□ 0.49
TPM4-201ENST00000300933 CLDN14O95500 239 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 TEX38Q6PEX7 206 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 TMEM108Q6UXF1 575 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 MRGPRGQ86SM5 289 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 ZNRD1Q9P1U0 126 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 RNF7Q9UBF6 113 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 RAI1Q7Z5J4 1906 aaPredicted RBP18.12■□□□□ 0.49
TPM4-201ENST00000300933 K7ENP7 123 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 M0R1X1 148 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 ZG16O60844 167 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 WNT2P09544 360 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 MBD3L1Q8WWY6 194 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 P2RX4Q99571 388 aa18.12■□□□□ 0.49
TPM4-201ENST00000300933 CFHR2P36980 270 aa18.11■□□□□ 0.49
TPM4-201ENST00000300933 LOXL3P58215 753 aa18.11■□□□□ 0.49
TPM4-201ENST00000300933 NEUROG1Q92886 237 aa18.11■□□□□ 0.49
TPM4-201ENST00000300933 LHX4Q969G2 390 aa18.11■□□□□ 0.49
TPM4-201ENST00000300933 SCGB1D1O95968 90 aa18.11■□□□□ 0.49
TPM4-201ENST00000300933 RPL23P62829 140 aaKnown RBP18.11■□□□□ 0.49
TPM4-201ENST00000300933 H2BFWTQ7Z2G1 175 aa18.11■□□□□ 0.49
TPM4-201ENST00000300933 LRRC30A6NM36 301 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 ZNF525Q8N782 197 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 ZBTB34Q8NCN2 500 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 OR4C12Q96R67 309 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 CALYQ9NYX4 217 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms