RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 FAM103A1Q9BTL3 118 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 MEGF9Q9H1U4 602 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 LIN7CQ9NUP9 197 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 METTL1Q9UBP6 276 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 LINC00527Q9UJ94 153 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 VPREB3Q9UKI3 123 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 FBXO7Q9Y3I1 522 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 NUBP2Q9Y5Y2 271 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 ALG5Q9Y673 324 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 STAB1Q9NY15 2570 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 A0A1B0GVG6 124 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 A0A1B0GW64 132 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 C9orf170A2RU37 121 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 NCBP2LA6PVI3 153 aaKnown RBP5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 MPTX1A8MV57 137 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 VGLL3A8MV65 326 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 OOSP1A8MZH6 123 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 FCN1O00602 326 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 NBR2O15453 112 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 TXNL1O43396 289 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 SIX6O95475 246 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 CA2P00918 260 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 HOXB5P09067 269 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 OR4E1P0C645 316 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 UCP1P25874 307 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 CD1BP29016 333 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 HILS1P60008 231 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 BLCAPP62952 87 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 CBX3Q13185 183 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 MSMO1Q15800 293 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 RTL8BQ17RB0 113 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM177Q53S58 311 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 OR4A47Q6IF82 309 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 CCDC144NLQ6NUI1 221 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 C10orf99Q6UWK7 81 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 Q6ZNX1 250 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 LYZL2Q7Z4W2 148 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 LYG2Q86SG7 212 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 SLC25A42Q86VD7 318 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 PDPNQ86YL7 162 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 CMTM1Q8IZ96 169 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 SELENOHQ8IZQ5 122 aaKnown RBP5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 SLC35G3Q8N808 338 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 C5orf56Q8N8D9 126 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 Q8N9W7 124 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 DUSP18Q8NEJ0 188 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 OR2T10Q8NGZ9 312 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 GRPEL2Q8TAA5 225 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 GLYATL2Q8WU03 294 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 SSMEM1Q8WWF3 244 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 ADTRPQ96IZ2 230 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 AKR1E2Q96JD6 320 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF702PQ9H963 129 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 PLSCR3Q9NRY6 295 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM140Q9NV12 185 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 MOB4Q9Y3A3 225 aa5.14□□□□□ -1.59
DEPDC4-201ENST00000299185 BTBD17A6NE02 478 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 RNF212BA8MTL3 300 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 RRHO14718 337 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 OR2F2O95006 317 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 KRASP01116 189 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 IFNA2P01563 188 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 CRYGBP07316 175 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 BRS3P32247 399 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 KIR2DS2P43631 304 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 DYNLT3P51808 116 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 AKR1C2P52895 323 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 TAS2R31P59538 309 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 DHODHQ02127 395 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 EBI3Q14213 229 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 PLGLAQ15195 96 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 TNXAQ16473 311 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 TATDN3Q17R31 274 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 C5orf64Q2M2E5 130 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 KRTAP24-1Q3LI83 254 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 DHRS7BQ6IAN0 325 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 PLET1Q6UQ28 207 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 RBMS3Q6XE24 437 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 Q6ZRM9 215 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 Q6ZSV7 163 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 SGPP2Q8IWX5 399 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 UXS1Q8NBZ7 420 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 ZBTB34Q8NCN2 500 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 DMBX1Q8NFW5 382 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 RNASE11Q8TAA1 199 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF418Q8TF45 676 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 ABHD5Q8WTS1 349 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 GPR146Q96CH1 333 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 FLYWCH2Q96CP2 140 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF486Q96H40 463 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 SEC22AQ96IW7 307 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 NOL4LQ96MY1 436 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 RBM14Q96PK6 669 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 SLC25A21Q9BQT8 299 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 QTRT1Q9BXR0 403 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM222Q9H0R3 208 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 PRDM13Q9H4Q3 707 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF430Q9H8G1 570 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 PARP11Q9NR21 331 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 AP5S1Q9NUS5 200 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms