RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RLN2P04090 185 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 UBE2KP61086 200 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 ZNF546Q86UE3 836 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 ZNF429Q86V71 674 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 MEGF9Q9H1U4 602 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 TEX15Q9BXT5 2789 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 FSHBP01225 129 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 CRYGBP07316 175 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 LGALSLQ3ZCW2 172 aaPredicted RBP19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 C9orf62Q8N4C0 152 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 OR4A16Q8NH70 328 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 EAF1Q96JC9 268 aaPredicted RBP19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 MAGT1Q9H0U3 335 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 TNFSF18Q9UNG2 199 aa19.75■□□□□ 0.75
GTF2A1-201ENST00000298173 SMAD7O15105 426 aaKnown RBP19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 NXPH3O95157 252 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 IGKV1D-33P01593 117 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 IGKV1-33P01594 117 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 BPIFB3P59826 476 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 TNFRSF9Q07011 255 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 PDLIM3Q53GG5 364 aaPredicted RBP19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 THNSL2Q86YJ6 484 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 OR52E5Q8NH55 327 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 OR4A5Q8NH83 315 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 VSTM2AQ8TAG5 236 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 TMEM167AQ8TBQ9 72 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 QTRT1Q9BXR0 403 aaKnown RBP19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 TMEM14BQ9NUH8 114 aa19.74■□□□□ 0.75
GTF2A1-201ENST00000298173 C15orf61A6NNL5 157 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 KBTBD11O94819 623 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 MOSP00540 346 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 SNRNP70P08621 437 aaKnown RBP19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 CD24P25063 80 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 CNTFRP26992 372 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 PSG5Q15238 335 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 MRGPRG-AS1Q2M3A8 158 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 FBLN7Q53RD9 439 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 Q8N6K4 173 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 TEX45Q8NA69 505 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 TSNAXQ99598 290 aaKnown RBP19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 ITGB1BP2Q9UKP3 347 aa19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 FOXA2Q9Y261 457 aaPredicted RBP19.73■□□□□ 0.75
GTF2A1-201ENST00000298173 A0A0U1RQK1 487 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 ARPC5O15511 151 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 SYNGR2O43760 224 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 CHST1O43916 411 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 SNAPC5O75971 98 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 CXCL2P19875 107 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 OR2B8PP59922 312 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 VMA21Q3ZAQ7 101 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 OR2T10Q8NGZ9 312 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 FLNAP21333 2647 aaKnown RBP19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 MYO9AB2RTY4 2548 aa19.72■□□□□ 0.75
GTF2A1-201ENST00000298173 E5RGE8 158 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 SLC25A17O43808 307 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 TMEM50AO95807 157 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 BRS3P32247 399 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 DYNLT3P51808 116 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 PAX9P55771 341 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 NPBQ8NG41 125 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 DCUN1D4Q92564 292 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 SOX21Q9Y651 276 aaPredicted RBP19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 RBMXL2O75526 392 aaKnown RBP19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 FGF2P09038 288 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 F2RL1P55085 397 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 KRTAP1-1Q07627 177 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 CACFD1Q9UGQ2 172 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 PRNDQ9UKY0 176 aa19.71■□□□□ 0.75
GTF2A1-201ENST00000298173 NOTCH2Q04721 2471 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 RNF222A6NCQ9 220 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 KCNAB3O43448 404 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 FAM120AOSQ5T036 256 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 MFFQ9GZY8 342 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 RBKSQ9H477 322 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 PLSCR3Q9NRY6 295 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 ZNF257Q9Y2Q1 563 aa19.7■□□□□ 0.74
GTF2A1-201ENST00000298173 SSSCA1O60232 199 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 SPDEFO95238 335 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 FAM106CPP0CH98 169 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 SPCS3P61009 180 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 HSPE1P61604 102 aaKnown RBP19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 HNF4GQ14541 408 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 ACOT7LQ6ZUV0 252 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 NANPQ8TBE9 248 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 RAB40CQ96S21 281 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 NUP50Q9UKX7 468 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 SIGLEC9Q9Y336 463 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 BOLA1Q9Y3E2 137 aa19.69■□□□□ 0.74
GTF2A1-201ENST00000298173 WRBO00258 174 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 MED6O75586 246 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 NDUFA3O95167 84 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 P2RY1P47900 373 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 RPL8P62917 257 aaKnown RBP19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 PIFOQ8TCI5 191 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 ZNF430Q9H8G1 570 aaPredicted RBP19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 TPSG1Q9NRR2 321 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 FKBP11Q9NYL4 201 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 HSPB11Q9Y547 144 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 PLXNB1O43157 2135 aa19.68■□□□□ 0.74
GTF2A1-201ENST00000298173 HKR1P10072 659 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms