RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TNCP24821 2201 aa20.18■□□□□ 0.82
SPTSSA-201ENST00000298130 PKIAP61925 76 aa20.18■□□□□ 0.82
SPTSSA-201ENST00000298130 ZNF600Q6ZNG1 722 aa20.18■□□□□ 0.82
SPTSSA-201ENST00000298130 PRR7Q8TB68 274 aa20.18■□□□□ 0.82
SPTSSA-201ENST00000298130 ARFGEF3Q5TH69 2177 aa20.18■□□□□ 0.82
SPTSSA-201ENST00000298130 PTPRBP23467 1997 aa20.18■□□□□ 0.82
SPTSSA-201ENST00000298130 SCO2A0A1W2PP80 73 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 TSTD3H0UI37 97 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 PLA2G2CQ5R387 149 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 MOGAT3Q86VF5 341 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 ZNF664Q8N3J9 261 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 PXMP4Q9Y6I8 212 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 GVINP1Q7Z2Y8 2422 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 SPRY3O43610 288 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 SNRPCP09234 159 aaKnown RBP20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 JOSD1Q15040 202 aaPredicted RBP20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 ANAPC16Q96DE5 110 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 TMEM140Q9NV12 185 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 ACTL10Q5JWF8 245 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 DEFB108BQ8NET1 73 aa20.17■□□□□ 0.82
SPTSSA-201ENST00000298130 FOXH1O75593 365 aa20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 TGIF2LYQ8IUE0 185 aa20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 GCSAMQ8N6F7 178 aa20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 HPRT1P00492 218 aa20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 KITLGP21583 273 aa20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 TMEM256Q8N2U0 113 aa20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 SEPSECSQ9HD40 501 aaKnown RBP20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 ZNRD1Q9P1U0 126 aa20.16■□□□□ 0.82
SPTSSA-201ENST00000298130 NUPR1O60356 82 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 GFRA3O60609 400 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 GGCTO75223 188 aaKnown RBP20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 CD33P20138 364 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 GUSBP1Q15486 140 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 SGMS2Q8NHU3 365 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 OR2V2Q96R30 315 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 RELBQ01201 579 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 MRPL41Q8IXM3 137 aaKnown RBP20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 C1orf159Q96HA4 380 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 GGTLC1Q9BX51 225 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 IFI27L2Q9H2X8 130 aa20.15■□□□□ 0.82
SPTSSA-201ENST00000298130 ADH4P08319 380 aa20.14■□□□□ 0.82
SPTSSA-201ENST00000298130 S1PR3Q99500 378 aa20.14■□□□□ 0.82
SPTSSA-201ENST00000298130 YTHDF2Q9Y5A9 579 aaKnown RBP20.14■□□□□ 0.82
SPTSSA-201ENST00000298130 M0R296 226 aa20.14■□□□□ 0.81
SPTSSA-201ENST00000298130 ACTL6BO94805 426 aa20.14■□□□□ 0.81
SPTSSA-201ENST00000298130 VDAC2P45880 294 aaPredicted RBP20.14■□□□□ 0.81
SPTSSA-201ENST00000298130 RPRMLQ8N4K4 120 aa20.14■□□□□ 0.81
SPTSSA-201ENST00000298130 DMXL2Q8TDJ6 3036 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 LOXL3P58215 753 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 SPCS3P61009 180 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 ERVK-16P61578 105 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 HTD2P86397 168 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 MOB3BQ86TA1 216 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 TRAPPC1Q9Y5R8 145 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 GRIFINA4D1Z8 144 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 M0R1B8 84 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 IGHG3P01860 377 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 OR4A8P0C604 315 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 IMMP2LQ96T52 175 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 TCF19Q9Y242 345 aa20.13■□□□□ 0.81
SPTSSA-201ENST00000298130 GNG10P50151 68 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 KCNIP4Q6PIL6 250 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 FAM90A1Q86YD7 464 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 SLC17A3O00476 420 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 DVL1O14640 695 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 TRIP6Q15654 476 aaKnown RBP20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 REC114Q7Z4M0 266 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 YLPM1P49750 1951 aaKnown RBP20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 TNFSF13O75888 250 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 FRMD6-AS1P0C7T7 363 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 ARSJQ5FYB0 599 aaPredicted RBP20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 OCC1Q8TAD7 63 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 SNRNP40Q96DI7 357 aaKnown RBP20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 STARD4Q96DR4 205 aa20.12■□□□□ 0.81
SPTSSA-201ENST00000298130 SRRM5B3KS81 715 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 VENTXO95231 258 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 CNN1P51911 297 aaKnown RBP20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 DMRTC2Q8IXT2 367 aaPredicted RBP20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 DSCAMO60469 2012 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 SPAARA0A1B0GVQ0 90 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 F6UZH7 168 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 PDE6DO43924 150 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 SRP14P37108 136 aaKnown RBP20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 HLA-DRB5Q30154 266 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 OR5R1Q8NH85 324 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 SFRP2Q96HF1 295 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 DIRC2Q96SL1 478 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 ZNF71Q9NQZ8 489 aaPredicted RBP20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 DKK4Q9UBT3 224 aa20.11■□□□□ 0.81
SPTSSA-201ENST00000298130 NDUFB7P17568 137 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 BHLHA15Q7RTS1 189 aaPredicted RBP20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 TCTEX1D1Q8N7M0 179 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 CALYQ9NYX4 217 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 AHRRA9YTQ3 701 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 PRSS46E5RG02 174 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 GATA2P23769 480 aaPredicted RBP20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 CT45A1Q5HYN5 189 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 CISD2Q8N5K1 135 aaKnown RBP20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 CT45A3Q8NHU0 189 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 ITLN1Q8WWA0 313 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms