RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 RNASEK-C17orf49H0YIS7 233 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 OVOL3O00110 214 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 IFNA17P01571 189 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 MMP9P14780 707 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 EFNA4P52798 201 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 CD81P60033 236 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 TLE4Q04727 773 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 IZUMO4Q1ZYL8 232 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
LSM6-201ENST00000296581 SPNS3Q6ZMD2 512 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 C1QL4Q86Z23 238 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 C11orf42Q8N5U0 333 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 DTD1Q8TEA8 209 aa12.73□□□□□ -0.37
LSM6-201ENST00000296581 UNKLQ9H9P5 680 aaKnown RBP12.73□□□□□ -0.37
LSM6-201ENST00000296581 SNRPCP09234 159 aaKnown RBP12.72□□□□□ -0.37
LSM6-201ENST00000296581 KIR2DS2P43631 304 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 CAV2P51636 162 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 GPR157Q5UAW9 335 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 LINC00311Q8N616 119 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 ZNF462Q96JM2 2506 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
LSM6-201ENST00000296581 NDUFS7O75251 213 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 THBS3P49746 956 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 KIAA0141Q14154 515 aaPredicted RBP12.72□□□□□ -0.37
LSM6-201ENST00000296581 ADTRPQ96IZ2 230 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 PATZ1Q9HBE1 687 aaKnown RBP12.72□□□□□ -0.37
LSM6-201ENST00000296581 SIRT7Q9NRC8 400 aa12.72□□□□□ -0.37
LSM6-201ENST00000296581 GPR137BO60478 399 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 FCGR3BO75015 233 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 HPRT1P00492 218 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 KRASP01116 189 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 IGHV1-8P0DP01 117 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 G6PCP35575 357 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 S1PR3Q99500 378 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 ATG101Q9BSB4 218 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 MAGT1Q9H0U3 335 aa12.71□□□□□ -0.37
LSM6-201ENST00000296581 TAAR5O14804 337 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 TPT1P13693 172 aaKnown RBP12.71□□□□□ -0.38
LSM6-201ENST00000296581 SRSF1Q07955 248 aaKnown RBP eCLIP12.71□□□□□ -0.38
LSM6-201ENST00000296581 AARDQ4LEZ3 155 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 MIDNQ504T8 468 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 AWAT1Q58HT5 328 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 FAM24BQ8N5W8 94 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 LY6G5BQ8NDX9 201 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 RAB24Q969Q5 203 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 GPR61Q9BZJ8 451 aa12.71□□□□□ -0.38
LSM6-201ENST00000296581 C7orf77A4D0Y5 90 aa12.7□□□□□ -0.38
LSM6-201ENST00000296581 SSSCA1O60232 199 aa12.7□□□□□ -0.38
LSM6-201ENST00000296581 RBP4P02753 201 aa12.7□□□□□ -0.38
LSM6-201ENST00000296581 SNRNP70P08621 437 aaKnown RBP12.7□□□□□ -0.38
LSM6-201ENST00000296581 FAM157CP0CG43 387 aa12.7□□□□□ -0.38
LSM6-201ENST00000296581 GPR6P46095 362 aaPredicted RBP12.7□□□□□ -0.38
LSM6-201ENST00000296581 ZNF833PQ6ZTB9 187 aa12.7□□□□□ -0.38
LSM6-201ENST00000296581 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
LSM6-201ENST00000296581 FLNCQ14315 2725 aa12.7□□□□□ -0.38
LSM6-201ENST00000296581 FAM157AC9JC47 383 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 C9JQL5 133 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 FAM90A26D6RGX4 464 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 J3QR06 171 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 CD5P06127 495 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 OR2C3Q8N628 320 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 TMED6Q8WW62 240 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 LYRM2Q9NU23 88 aaPredicted RBP12.69□□□□□ -0.38
LSM6-201ENST00000296581 ZNRD1Q9P1U0 126 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 PPIAL4CA0A0B4J2A2 164 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 EREGO14944 169 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 CHST1O43916 411 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 TMEM50AO95807 157 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 PPIAL4GP0DN37 164 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 NDUFA6P56556 154 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 VAMP2P63027 116 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 OR4S2Q8NH73 311 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 OR9G1Q8NH87 305 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 NDUFAF3Q9BU61 184 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 TMEM133Q9H2Q1 129 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 FBXL17Q9UF56 701 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 KPTNQ9Y664 436 aa12.69□□□□□ -0.38
LSM6-201ENST00000296581 DCHS2Q6V1P9 2916 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 NXPH3O95157 252 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 CT45A6P0DMU7 189 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 CT45A5P0DMU8 189 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 CT45A7P0DMV0 189 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 PAX9P55771 341 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 FAM71F2Q6NXP2 309 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 H2BFWTQ7Z2G1 175 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 BAP18Q8IXM2 172 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 ZNF295-AS1Q8N0V1 137 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 RAB40CQ96S21 281 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 A8MWP6 167 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 SEC14L6B5MCN3 397 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 C22orf46C9J442 243 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 ZNF137PP52743 207 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 GNB2P62879 340 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.68□□□□□ -0.38
LSM6-201ENST00000296581 DOK5Q9P104 306 aa12.68□□□□□ -0.38
LSM6-201ENST00000296581 FAM24AA6NFZ4 105 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms