RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 FGF5P12034 268 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 TM4SF20Q53R12 229 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 CDX2Q99626 313 aaPredicted RBP13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 A0A0A6YYD4 124 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 GDF9O60383 454 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 NUDT3O95989 172 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 HSPE1P61604 102 aaKnown RBP13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 GATAD1Q8WUU5 269 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 GFI1BQ5VTD9 330 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 ZNF124Q15973 351 aa13.02□□□□□ -0.32
SHROOM4-201ENST00000289292 C17orf98A8MV24 154 aa13.02□□□□□ -0.32
SHROOM4-201ENST00000289292 C16orf97H3BN30 126 aa13.02□□□□□ -0.32
SHROOM4-201ENST00000289292 NDUFS6O75380 124 aaKnown RBP13.02□□□□□ -0.32
SHROOM4-201ENST00000289292 CELA3AP09093 270 aa13.02□□□□□ -0.32
SHROOM4-201ENST00000289292 GAS1P54826 345 aa13.02□□□□□ -0.32
SHROOM4-201ENST00000289292 SAXO1Q8IYX7 474 aa13.02□□□□□ -0.32
SHROOM4-201ENST00000289292 LYPD3O95274 346 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 IGFBP2P18065 325 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNRF1Q8ND25 227 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 SCARF2Q96GP6 870 aaPredicted RBP13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 C18orf12Q96KH6 178 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 S4R3C0 116 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 A0A0G2JMM0 328 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 A0A1W2PPB8 328 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 A0A1W2PRS3 328 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 KIR3DP1A8MWS1 328 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 IGHV3-23P01764 117 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 TFF1P04155 84 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 TNFSF10P50591 281 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 CCL20P78556 96 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 SCNM1Q9BWG6 230 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 SYNGR3O43761 229 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 C2orf83Q53S99 150 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 PCSK4Q6UW60 755 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 NPIPB3Q92617 1050 aa13.02□□□□□ -0.33
SHROOM4-201ENST00000289292 NKX2-8O15522 239 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 SDF2L1Q9HCN8 221 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 ADMP35318 185 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 PMS2CLQ68D20 193 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 PSMG3Q9BT73 122 aaPredicted RBP13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 HEXA-AS1Q9H8Q6 139 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 A0A1W2PQM1 296 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNF324O75467 553 aaPredicted RBP13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 PRB4P10163 310 aaPredicted RBP13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 C10orf128Q5T292 105 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 SHISA5Q8N114 240 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 HOXB1P14653 301 aaPredicted RBP13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 MBNL2Q5VZF2 373 aaKnown RBP13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 OR4A5Q8NH83 315 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 PRR7Q8TB68 274 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 LYZL4Q96KX0 146 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 C16orf92Q96LL3 132 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 BRWD3Q6RI45 1802 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 ANK1P16157 1881 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 B4E171 279 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 IL36BQ9NZH7 164 aa13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNF256Q9Y2P7 627 aaPredicted RBP13.01□□□□□ -0.33
SHROOM4-201ENST00000289292 AREGP15514 252 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 GATA2P23769 480 aaPredicted RBP13□□□□□ -0.33
SHROOM4-201ENST00000289292 DCTN5Q9BTE1 182 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 IGHV3-35A0A0C4DH35 117 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 C1QTNF9BB2RNN3 333 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 FAM201AQ5SY85 155 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 TXNDC17Q9BRA2 123 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 hCG_38984A0A1B0GV85 526 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 CD55P08174 381 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 SMIM13P0DJ93 91 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 TTC32Q5I0X7 151 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 RTN4RL2Q86UN3 420 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 C18orf15Q96N68 181 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 TRBV9A0A0B4J1U6 114 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BKO60814 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BJP06899 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BOP23527 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BBP33778 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 EMP1P54849 157 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 LOXL3P58215 753 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BDP58876 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BCP62807 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST2H2BEQ16778 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST2H2BFQ5QNW6 126 aaPredicted RBP13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BHQ93079 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 KCNS1Q96KK3 526 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BNQ99877 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 HIST1H2BMQ99879 126 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 MRPL13Q9BYD1 178 aaKnown RBP13□□□□□ -0.33
SHROOM4-201ENST00000289292 TMEM238LA0A1B0GVL6 79 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 A6NJY4 79 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 IFI6P09912 130 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 RIPPLY3P57055 190 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 OR10AG1Q8NH19 301 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 MIEN1Q9BRT3 115 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
SHROOM4-201ENST00000289292 ZNF441Q8N8Z8 693 aa12.99□□□□□ -0.33
SHROOM4-201ENST00000289292 A0A087WWC5 75 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms