RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PUSL1Q8N0Z8 303 aaKnown RBP19.54■□□□□ 0.72
PDF-201ENST00000288022 OR11H1Q8NG94 326 aa19.54■□□□□ 0.72
PDF-201ENST00000288022 RABL2AQ9UBK7 228 aaPredicted RBP19.54■□□□□ 0.72
PDF-201ENST00000288022 RABL2BQ9UNT1 228 aa19.54■□□□□ 0.72
PDF-201ENST00000288022 MEGF8Q7Z7M0 2845 aa19.53■□□□□ 0.72
PDF-201ENST00000288022 TAS2R19P59542 299 aa19.53■□□□□ 0.72
PDF-201ENST00000288022 ASPHD1Q5U4P2 390 aa19.53■□□□□ 0.72
PDF-201ENST00000288022 TMEM167AQ8TBQ9 72 aa19.53■□□□□ 0.72
PDF-201ENST00000288022 HRASLSQ9HDD0 168 aa19.53■□□□□ 0.72
PDF-201ENST00000288022 COA4Q9NYJ1 87 aa19.53■□□□□ 0.72
PDF-201ENST00000288022 I3L521 148 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 DUS4LO95620 317 aaKnown RBP19.52■□□□□ 0.72
PDF-201ENST00000288022 NQO2P16083 231 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 TAS2R31P59538 309 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 SSBP1Q04837 148 aaKnown RBP19.52■□□□□ 0.72
PDF-201ENST00000288022 C10orf55Q5SWW7 151 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 OR4A47Q6IF82 309 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 SLC38A6Q8IZM9 456 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 TMEM229BQ8NBD8 167 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 OR1N2Q8NGR9 330 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 SMIM4Q8WVI0 70 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 SPIN2AQ99865 258 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 SPIN2BQ9BPZ2 258 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 RSRP1Q9BUV0 290 aa19.52■□□□□ 0.72
PDF-201ENST00000288022 RBM38Q9H0Z9 239 aaKnown RBP19.52■□□□□ 0.72
PDF-201ENST00000288022 H3BUA1 57 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 S1PR2O95136 353 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 RAB3DO95716 219 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 IGHV3-11P01762 117 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 PGAM2P15259 253 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 F2RP25116 425 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 TNFSF8P32971 234 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 UCP3P55916 312 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 RUNX1Q01196 453 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 KPRPQ5T749 579 aaPredicted RBP19.51■□□□□ 0.71
PDF-201ENST00000288022 ARRDC1Q8N5I2 433 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 DMBX1Q8NFW5 382 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 DPF1Q92782 380 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 DGCR14Q96DF8 476 aaKnown RBP19.51■□□□□ 0.71
PDF-201ENST00000288022 NXF2Q9GZY0 626 aaKnown RBP19.51■□□□□ 0.71
PDF-201ENST00000288022 ALX4Q9H161 411 aaPredicted RBP19.51■□□□□ 0.71
PDF-201ENST00000288022 PLEKHA2Q9HB19 425 aa19.51■□□□□ 0.71
PDF-201ENST00000288022 CTDSPLO15194 276 aa19.5■□□□□ 0.71
PDF-201ENST00000288022 LGALS1P09382 135 aaKnown RBP19.5■□□□□ 0.71
PDF-201ENST00000288022 MAS1LP35410 378 aa19.5■□□□□ 0.71
PDF-201ENST00000288022 ZNF616Q08AN1 781 aa19.5■□□□□ 0.71
PDF-201ENST00000288022 STEAP1BQ6NZ63 245 aa19.5■□□□□ 0.71
PDF-201ENST00000288022 OR4A5Q8NH83 315 aa19.5■□□□□ 0.71
PDF-201ENST00000288022 FYTTD1Q96QD9 318 aaKnown RBP19.5■□□□□ 0.71
PDF-201ENST00000288022 MCRIP2Q9BUT9 160 aaKnown RBP19.5■□□□□ 0.71
PDF-201ENST00000288022 BET1LQ9NYM9 111 aa19.5■□□□□ 0.71
PDF-201ENST00000288022 COMMD9Q9P000 198 aa19.5■□□□□ 0.71
PDF-201ENST00000288022 FABP12A6NFH5 140 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 OR9G9P0C7N8 305 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 RPA2P15927 270 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 LPAR6P43657 344 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 RPL27AP46776 148 aaKnown RBP19.49■□□□□ 0.71
PDF-201ENST00000288022 ERVK-16P61578 105 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 RPL8P62917 257 aaKnown RBP19.49■□□□□ 0.71
PDF-201ENST00000288022 SCGB2B2Q4G0G5 96 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 TBC1D26Q86UD7 250 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 OR4D10Q8NGI6 311 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 GPR61Q9BZJ8 451 aa19.49■□□□□ 0.71
PDF-201ENST00000288022 C13orf42A0A1B0GVH6 325 aa19.48■□□□□ 0.71
PDF-201ENST00000288022 PRB2P02812 416 aaPredicted RBP19.48■□□□□ 0.71
PDF-201ENST00000288022 CD74P04233 296 aa19.48■□□□□ 0.71
PDF-201ENST00000288022 OR8U8P0C7N1 319 aa19.48■□□□□ 0.71
PDF-201ENST00000288022 PPP5CP53041 499 aa19.48■□□□□ 0.71
PDF-201ENST00000288022 FHL3Q13643 280 aa19.48■□□□□ 0.71
PDF-201ENST00000288022 FOXB2Q5VYV0 432 aa19.48■□□□□ 0.71
PDF-201ENST00000288022 TMEM140Q9NV12 185 aa19.48■□□□□ 0.71
PDF-201ENST00000288022 NOTCH1P46531 2555 aa19.47■□□□□ 0.71
PDF-201ENST00000288022 HMX3A6NHT5 357 aa19.47■□□□□ 0.71
PDF-201ENST00000288022 ZNF701M0R085 212 aaPredicted RBP19.47■□□□□ 0.71
PDF-201ENST00000288022 WIPF1O43516 503 aa19.47■□□□□ 0.71
PDF-201ENST00000288022 HLA-GP17693 338 aa19.47■□□□□ 0.71
PDF-201ENST00000288022 POU2AF1Q16633 256 aa19.47■□□□□ 0.71
PDF-201ENST00000288022 LHFPL1Q86WI0 220 aa19.47■□□□□ 0.71
PDF-201ENST00000288022 ADAD2Q8NCV1 583 aaKnown RBP19.47■□□□□ 0.71
PDF-201ENST00000288022 A0A0G2JLM5 398 aa19.46■□□□□ 0.71
PDF-201ENST00000288022 DPPA5A6NC42 116 aa19.46■□□□□ 0.71
PDF-201ENST00000288022 S100A5P33763 92 aa19.46■□□□□ 0.71
PDF-201ENST00000288022 DEFA5Q01523 94 aa19.46■□□□□ 0.71
PDF-201ENST00000288022 MEF2DQ14814 521 aa19.46■□□□□ 0.71
PDF-201ENST00000288022 FAAP20Q6NZ36 180 aa19.46■□□□□ 0.71
PDF-201ENST00000288022 SLC2A9Q9NRM0 540 aa19.46■□□□□ 0.71
PDF-201ENST00000288022 TRAV3A0A0B4J244 114 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 MARCH11A6NNE9 402 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 LINC01619G3V211 115 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 UPK2O00526 184 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 KRASP01116 189 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 IL6RP08887 468 aaPredicted RBP19.45■□□□□ 0.7
PDF-201ENST00000288022 MYOD1P15172 320 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 PI3P19957 117 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 ZNF585BQ52M93 769 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 PDLIM3Q53GG5 364 aaPredicted RBP19.45■□□□□ 0.7
PDF-201ENST00000288022 SLC25A42Q86VD7 318 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 TERB2Q8NHR7 220 aa19.45■□□□□ 0.7
PDF-201ENST00000288022 ZNF486Q96H40 463 aaPredicted RBP19.45■□□□□ 0.7
PDF-201ENST00000288022 IGHV4OR15-8A0A075B7B6 117 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms