RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TRAV40A0A0B4J280 105 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 CELA3BP08861 270 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 FBLN7Q53RD9 439 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 CD300LDQ6UXZ3 194 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 IFNL4K9M1U5 179 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 FOXA3P55318 350 aaPredicted RBP17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 RBMY1BA6NDE4 496 aaKnown RBP17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 RBMY1EA6NEQ0 496 aaKnown RBP17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 RBMY1DP0C7P1 496 aaKnown RBP17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 RBMY1A1P0DJD3 496 aaKnown RBP17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 RBMY1CP0DJD4 496 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 PHLDA1Q8WV24 401 aaPredicted RBP17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 ERGP11308 486 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 CSRP2Q16527 193 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 DRAM1Q8N682 238 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 SSC4DQ8WTU2 575 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 OR10S1Q8NGN2 331 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 SCGB3A1Q96QR1 104 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 SDF2L1Q9HCN8 221 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 PTP4A3O75365 173 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 C1orf53Q5VUE5 145 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 EFEMP2O95967 443 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 RPS20P60866 119 aaKnown RBP17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 LEMD1Q68G75 181 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 TRGC2P03986 189 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 SCAND1P57086 179 aa17.28■□□□□ 0.36
CACNA1B-201ENST00000277549 C8orf88P0DMB2 117 aa17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 C1QTNF12Q5T7M4 302 aa17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 TMEM219Q86XT9 240 aa17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 PPIFP30405 207 aaKnown RBP17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 HSPE1P61604 102 aaKnown RBP17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 WDFY2Q96P53 400 aa17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 ZNF385CQ66K41 422 aaPredicted RBP17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 GNLYP22749 145 aa17.27■□□□□ 0.36
CACNA1B-201ENST00000277549 CLDND2Q8NHS1 167 aa17.27■□□□□ 0.35
CACNA1B-201ENST00000277549 NABP2Q9BQ15 211 aa17.27■□□□□ 0.35
CACNA1B-201ENST00000277549 SIRT4Q9Y6E7 314 aaPredicted RBP17.27■□□□□ 0.35
CACNA1B-201ENST00000277549 TRIP11Q15643 1979 aa17.27■□□□□ 0.35
CACNA1B-201ENST00000277549 IGKV1-8A0A0C4DH67 115 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 NPIPB4C9JG80 1138 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 ASAH2BP0C7U1 165 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 OR13A1Q8NGR1 328 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 TMEM45BQ96B21 275 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 APOMO95445 188 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 ERASQ7Z444 233 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 MIXL1Q9H2W2 232 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 TYMSP04818 313 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 TMEM167AQ8TBQ9 72 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 CDC42EP3Q9UKI2 254 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 PEX7O00628 323 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 GATA2P23769 480 aaPredicted RBP17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 V9GYH0 126 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 MDC1Q14676 2089 aaKnown RBP17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 ZNF729A6NN14 1252 aaPredicted RBP17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 HMSDA8MTL9 139 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 TNFRSF9Q07011 255 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 CYP2G1PQ6ZSU1 146 aa17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 TAF15Q92804 592 aaKnown RBP eCLIP17.26■□□□□ 0.35
CACNA1B-201ENST00000277549 SLC25A20O43772 301 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 COX19Q49B96 90 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 HBBP68871 147 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 TCF24Q7RTU0 167 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 PRELID3AQ96N28 172 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 LINC00862A6NCI5 91 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 C3orf56Q8N813 242 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 CITED2Q99967 270 aaPredicted RBP17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 TRAF4Q9BUZ4 470 aaPredicted RBP17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 MRPL20Q9BYC9 149 aaKnown RBP17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 TJP1Q07157 1748 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 SLC25A47Q6Q0C1 308 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 TCF19Q9Y242 345 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 A0A0G2JLM5 398 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 A0A1W2PPC1 479 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 UBE2V2Q15819 145 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 TMEM222Q9H0R3 208 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 HLA-DRB1P01911 266 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 LHFPL6Q9Y693 200 aa17.25■□□□□ 0.35
CACNA1B-201ENST00000277549 CHCHD5Q9BSY4 110 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 CECR9P0C854 216 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 JMJD8Q96S16 334 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 CD8AP01732 235 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 GALP22466 123 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 JPT1Q9UK76 154 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 ZNFX1Q9P2E3 1918 aaKnown RBP17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 CASP8AP2Q9UKL3 1982 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 PRR31Q5SQ13 230 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 MAPK1IP1LQ8NDC0 245 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 PRSS22Q9GZN4 317 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 CTDSPLO15194 276 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 FAM74A7A6NL05 159 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 ZNF79Q15937 498 aa17.24■□□□□ 0.35
CACNA1B-201ENST00000277549 H3BRM9 83 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 CFDP00746 253 aaPredicted RBP17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 MUC1P15941 1255 aaPredicted RBP17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 CCL3L1P16619 93 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 TMEM252Q8N6L7 170 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 OR10AG1Q8NH19 301 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms