RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 RPLP1P05386 114 aaKnown RBP10.09□□□□□ -0.79
SHPRH-201ENST00000275233 C8orf88P0DMB2 117 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 C11orf44Q8N8P7 122 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 C7orf69Q9H7B7 122 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 GCGP01275 180 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 DNM1P46Q6ZS02 220 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 PPP1R3EQ9H7J1 279 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 HIST1H4GQ99525 98 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 IGKV1D-43A0A0B4J1Z2 117 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 PRB4P10163 310 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-201ENST00000275233 HINT1P49773 126 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-201ENST00000275233 CLEC19AQ6UXS0 136 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 ACP7Q6ZNF0 438 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 OR13C6PQ8NH95 151 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 TRBV5-7A0A0A0MS05 114 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-201ENST00000275233 IFITM3Q01628 133 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 ATOH7Q8N100 152 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 STPG2Q8N412 459 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 GALNT14Q96FL9 552 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 BEX4Q9NWD9 120 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-201ENST00000275233 PARP14Q460N5 1801 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 SCN8AQ9UQD0 1980 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 RBBP6Q7Z6E9 1792 aaKnown RBP10.08□□□□□ -0.8
SHPRH-201ENST00000275233 CD24P25063 80 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 MEF2BQ02080 365 aaPredicted RBP10.08□□□□□ -0.8
SHPRH-201ENST00000275233 NABP2Q9BQ15 211 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 ZNF646O15015 1829 aaPredicted RBP10.08□□□□□ -0.8
SHPRH-201ENST00000275233 IGHV1-2P23083 117 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 ICAM4Q14773 271 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 TIMM23BQ5SRD1 257 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 ZCCHC24Q8N2G6 241 aaKnown RBP10.08□□□□□ -0.8
SHPRH-201ENST00000275233 SNRNP200O75643 2136 aaKnown RBP10.08□□□□□ -0.8
SHPRH-201ENST00000275233 GPR183P32249 361 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 CD1AP06126 327 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 FHITP49789 147 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 RIPPLY2Q5TAB7 128 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 LHFPL5Q8TAF8 219 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 CTHRC1Q96CG8 243 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 APCDD1LQ8NCL9 501 aa10.08□□□□□ -0.8
SHPRH-201ENST00000275233 M0R381 172 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 ZNF146Q15072 292 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 GEMIN7Q9H840 131 aaKnown RBP10.07□□□□□ -0.8
SHPRH-201ENST00000275233 IGHMP01871 453 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 CEACAM1P13688 526 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 TSPOP30536 169 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 SAXO1Q8IYX7 474 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 TMEM45BQ96B21 275 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 DUX3Q96PT4 197 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 PARLQ9H300 379 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FBXL7Q9UJT9 491 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 LYNX1G3V0Z9 82 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 LYNX1P0DP58 116 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-201ENST00000275233 NRIP2Q9BQI9 281 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 CEACAM4O75871 244 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 TMEM187Q14656 261 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 UNQ9370/PRO34162Q6UXP9 181 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 C9orf106Q8NAJ2 232 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A10PA6NDY2 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A18PA6NE21 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A16PA6NEW6 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A20PA6NIJ5 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A8PA6NJQ4 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A7PA6NKC0 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A22PA8MWA6 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A12PA8MX19 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A5PA8MXJ8 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A23PA8MXZ1 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 TCF21O43680 179 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A15PP0C7V4 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A13PP0C7W8 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A14PP0C7W9 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM90A24PP0C7X0 464 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 RNASE4P34096 147 aaKnown RBP10.07□□□□□ -0.8
SHPRH-201ENST00000275233 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
SHPRH-201ENST00000275233 ZXDCQ2QGD7 858 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-201ENST00000275233 FAM57AQ8TBR7 257 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 ZNF256Q9Y2P7 627 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-201ENST00000275233 ICE1Q9Y2F5 2266 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 SRIP30626 198 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 C1orf100Q5SVJ3 147 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 DMRTA2Q96SC8 542 aa10.07□□□□□ -0.8
SHPRH-201ENST00000275233 IGHV2OR16-5A0A0B4J2B6 119 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 TGFBR3LH3BV60 316 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 COX5BP10606 129 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 ANKRD36A6QL64 1941 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 TRBV20OR9-2A0A075B6H5 130 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 GRIFINA4D1Z8 144 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 STAG3L2P0CL84 134 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 GLRXP35754 106 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 CYP2G1PQ6ZSU1 146 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 PPP1R27Q86WC6 154 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 SIAH2O43255 324 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 OR4D5Q8NGN0 318 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 CABIN1Q9Y6J0 2220 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms