RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 SF3B6Q9Y3B4 125 aaKnown RBP13.66□□□□□ -0.22
UBR3-201ENST00000272793 SMAD7O15105 426 aaKnown RBP13.66□□□□□ -0.22
UBR3-201ENST00000272793 GPR183P32249 361 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 PTP4A1Q93096 173 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 OR52E5Q8NH55 327 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 GFRA3O60609 400 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
UBR3-201ENST00000272793 C17orf47Q8NEP4 570 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 TMEM229AB2RXF0 380 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 CCL21O00585 134 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 RAG2P55895 527 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 C1orf162Q8NEQ5 155 aaPredicted RBP13.66□□□□□ -0.22
UBR3-201ENST00000272793 OR51G1Q8NGK1 321 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 PATJQ8NI35 1801 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 HELZP42694 1942 aaKnown RBP13.66□□□□□ -0.22
UBR3-201ENST00000272793 SRFP11831 508 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 FOXA3P55318 350 aaPredicted RBP13.66□□□□□ -0.22
UBR3-201ENST00000272793 GFERP55789 205 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 C3AR1Q16581 482 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 TMEM74BQ9NUR3 256 aa13.66□□□□□ -0.22
UBR3-201ENST00000272793 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
UBR3-201ENST00000272793 GCM2O75603 506 aaPredicted RBP13.65□□□□□ -0.22
UBR3-201ENST00000272793 TCTEX1D4Q5JR98 221 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 CLDND2Q8NHS1 167 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 PDLIM7Q9NR12 457 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 PRR35P0CG20 571 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 FBLN7Q53RD9 439 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 VSTM2LQ96N03 204 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 PRB1P04280 392 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 MPC1Q9Y5U8 109 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 ZIC3O60481 467 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 FAM19A2Q8N3H0 131 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 MYOM1P52179 1685 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 ZNF658BQ4V348 819 aaPredicted RBP13.65□□□□□ -0.22
UBR3-201ENST00000272793 LOXL4Q96JB6 756 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 ERG28Q9UKR5 140 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 ZNF257Q9Y2Q1 563 aa13.65□□□□□ -0.22
UBR3-201ENST00000272793 FAM53BQ14153 422 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 ZNF645Q8N7E2 425 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 SSBP3Q9BWW4 388 aaPredicted RBP13.64□□□□□ -0.23
UBR3-201ENST00000272793 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 TMEFF2Q9UIK5 374 aaPredicted RBP13.64□□□□□ -0.23
UBR3-201ENST00000272793 RUNX1Q01196 453 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 C1QTNF12Q5T7M4 302 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 RPL8P62917 257 aaKnown RBP13.64□□□□□ -0.23
UBR3-201ENST00000272793 GAGE2AQ6NT46 116 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 MRPL24Q96A35 216 aaKnown RBP13.64□□□□□ -0.23
UBR3-201ENST00000272793 CICQ96RK0 1608 aaPredicted RBP13.64□□□□□ -0.23
UBR3-201ENST00000272793 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 hADV29S1A0JD25 119 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 TCRAP04437 139 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 CEACAM21Q3KPI0 293 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 DNAJC30Q96LL9 226 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 MVB12AQ96EY5 273 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 KLF12Q9Y4X4 402 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 ACACAQ13085 2346 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 CXCL16Q9H2A7 254 aa13.64□□□□□ -0.23
UBR3-201ENST00000272793 TRAV24A0A0B4J272 114 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 SLC25A1P53007 311 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 LHBP01229 141 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 HSPE1P61604 102 aaKnown RBP13.63□□□□□ -0.23
UBR3-201ENST00000272793 LINC00305Q7Z4B0 112 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 DMRT1Q9Y5R6 373 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 CD33P20138 364 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 ADMP35318 185 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 PEAR1Q5VY43 1037 aaPredicted RBP13.63□□□□□ -0.23
UBR3-201ENST00000272793 GLMPQ8WWB7 406 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 EVI2AP22794 236 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 LTBRP36941 435 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 CENPWQ5EE01 88 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 GTSCR1Q86UQ5 136 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 MS4A5Q9H3V2 200 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 CHKB-CPT1BH3BT56 60 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 PLPP3O14495 311 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 PRB2P02812 416 aaPredicted RBP13.63□□□□□ -0.23
UBR3-201ENST00000272793 MIC13Q5XKP0 118 aa13.63□□□□□ -0.23
UBR3-201ENST00000272793 RLFQ13129 1914 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 ZNF488Q96MN9 340 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 CAMTA1Q9Y6Y1 1673 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 IGHV3OR16-13A0A075B7E8 117 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 IGHV3OR16-10A0A075B7F0 116 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 IGHV3-74A0A0B4J1X5 117 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 TRGV4A0A0C4DH28 118 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 CCL19Q99731 98 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 EML5Q05BV3 1969 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 ARAP2Q8WZ64 1704 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 LINC00596Q86U02 117 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 TOGARAM1Q9Y4F4 1720 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 ZNF345Q14585 488 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 CHST5Q9GZS9 411 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 TRAV30A0A087WSZ9 112 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 A0A1B0GTL3 188 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 CD7P09564 240 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 KIDINS220Q9ULH0 1771 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 C2orf82Q6UX34 121 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 POC1AQ8NBT0 407 aa13.62□□□□□ -0.23
UBR3-201ENST00000272793 HIKESHIQ53FT3 197 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 SIGLEC7Q9Y286 467 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms