RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 RTP5Q14D33 572 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 SLC25A38Q96DW6 304 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 PIKFYVEQ9Y2I7 2098 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 PEX7O00628 323 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 DXOO77932 396 aaKnown RBP4.69□□□□□ -1.66
XRN1-201ENST00000264951 KIAA1644Q3SXP7 199 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 FOXC2Q99958 501 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 C6orf106Q9H6K1 298 aaPredicted RBP4.69□□□□□ -1.66
XRN1-201ENST00000264951 ANKRD31Q8N7Z5 1873 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 TRAV1-1A0A0B4J248 108 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 IL11P20809 199 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 CBLN1P23435 193 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 Q5PR19 223 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 MIC13Q5XKP0 118 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 GOLT1AQ6ZVE7 132 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 SMCHD1A6NHR9 2005 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 TMEM8BA6NDV4 472 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 PLAUP00749 431 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 KLK2P20151 261 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 DUTP33316 252 aaKnown RBP4.69□□□□□ -1.66
XRN1-201ENST00000264951 ADAD2Q8NCV1 583 aaKnown RBP4.69□□□□□ -1.66
XRN1-201ENST00000264951 KLK13Q9UKR3 277 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 TRAV21A0A0B4J279 112 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 FAM157AC9JC47 383 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 NBEAP1P0C6P0 100 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 VSIG10L2P0DP72 767 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 STARD6P59095 220 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 C8orf44Q96CB5 159 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 NEU1Q99519 415 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 SEMA5BQ9P283 1151 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 CRYBB3P26998 211 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 RUNX1Q01196 453 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 C8orf82Q6P1X6 216 aaPredicted RBP4.69□□□□□ -1.66
XRN1-201ENST00000264951 LINC01465Q8N7H1 131 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 CCL26Q9Y258 94 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 OTOFQ9HC10 1997 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 TRBV5-7A0A0A0MS05 114 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 A0A0U1RQS6 177 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 BGLAPP02818 100 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 UTF1Q5T230 341 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 RFLNAQ6ZTI6 216 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 CXorf67Q86X51 503 aaPredicted RBP4.69□□□□□ -1.66
XRN1-201ENST00000264951 TMEM74BQ9NUR3 256 aa4.69□□□□□ -1.66
XRN1-201ENST00000264951 AHDC1Q5TGY3 1603 aaPredicted RBP4.69□□□□□ -1.66
XRN1-201ENST00000264951 NDUFC2O95298 119 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 AMER3Q8N944 861 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 NHP2Q9NX24 153 aaKnown RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 K7ESM1 405 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 DLEU1O43261 78 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 PGLYRP1O75594 196 aaPredicted RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 DUSP14O95147 198 aaKnown RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 SOX8P57073 446 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 ZP1P60852 638 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 PRSS53Q2L4Q9 553 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 DEFB109BQ30KR1 87 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 RTN4RL2Q86UN3 420 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 FER1L6-AS1Q8NA97 138 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 SSC4DQ8WTU2 575 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 OTORQ9NRC9 128 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 KLF12Q9Y4X4 402 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 ACACAQ13085 2346 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 IGHV3-15A0A0B4J1V0 119 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 HTN1P15515 57 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 TM4SF4P48230 202 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 FOXL1Q12952 345 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 UBE2V1Q13404 147 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 LTBP4Q8N2S1 1624 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 STRCP1A6NGW2 1772 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 MED12Q93074 2177 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 A0A0G2JMM0 328 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 A0A1W2PPB8 328 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 KIR3DP1A8MWS1 328 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 UCP1P25874 307 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 GFRA1P56159 465 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 SPINK9Q5DT21 86 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 ZNF818PQ6ZRF7 136 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 SELENOHQ8IZQ5 122 aaKnown RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 KLHDC9Q8NEP7 349 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 MED19A0JLT2 244 aaPredicted RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 PRKNO60260 465 aaPredicted RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 C1orf194Q5T5A4 169 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 PVRIGQ6DKI7 326 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 OR52E5Q8NH55 327 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 LRRC61Q9BV99 259 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 MRPL27Q9P0M9 148 aaKnown RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 SRP19P09132 144 aaKnown RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 PSG6Q00889 435 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 CLEC7AQ9BXN2 247 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 GLI3P10071 1580 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 SCN11AQ9UI33 1791 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 COL16A1Q07092 1604 aaPredicted RBP4.68□□□□□ -1.66
XRN1-201ENST00000264951 FABP5P3A8MUU1 101 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 TOMM40O96008 361 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 CLEC2AQ6UVW9 174 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 Q96M66 194 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 SMIM14Q96QK8 99 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.68□□□□□ -1.664e-7■■■■□ 21.3
XRN1-201ENST00000264951 TRGV11A0A075B6L2 103 aa4.68□□□□□ -1.66
XRN1-201ENST00000264951 SHISA7A6NL88 538 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms