RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 WDYHV1Q96HA8 205 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 MRPL16Q9NX20 251 aaKnown RBP10.27□□□□□ -0.77
SMG6-201ENST00000263073 UBE2L6O14933 153 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 ADMP35318 185 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 TRBV20OR9-2A0A075B6H5 130 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 APOHP02749 345 aaPredicted RBP10.27□□□□□ -0.77
SMG6-201ENST00000263073 TNFSF10P50591 281 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 LY6EQ16553 131 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 TMEM70Q9BUB7 260 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 FNDC4Q9H6D8 234 aaPredicted RBP10.27□□□□□ -0.77
SMG6-201ENST00000263073 C1QTNF9BB2RNN3 333 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 HSPE1P61604 102 aaKnown RBP10.26□□□□□ -0.77
SMG6-201ENST00000263073 SMIM8Q96KF7 97 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 ALKBH7Q9BT30 221 aaPredicted RBP10.26□□□□□ -0.77
SMG6-201ENST00000263073 RNASE7Q9H1E1 156 aaKnown RBP10.26□□□□□ -0.77
SMG6-201ENST00000263073 COX6CP09669 75 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 UNQ5815/PRO19632Q6UWF5 114 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 IDI2-AS1Q9NZ38 188 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 FGF5P12034 268 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 ID1P41134 155 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 KLF14Q8TD94 323 aaPredicted RBP10.26□□□□□ -0.77
SMG6-201ENST00000263073 GPR82Q96P67 336 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 SERF1AO75920 110 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 CA1P00915 261 aaPredicted RBP10.26□□□□□ -0.77
SMG6-201ENST00000263073 IL4P05112 153 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 CSRP3P50461 194 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 MARVELD3Q96A59 401 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 DCTN5Q9BTE1 182 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 NDUFA3O95167 84 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 HOXA5P20719 270 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 HBBP68871 147 aa10.26□□□□□ -0.77
SMG6-201ENST00000263073 PSMB11A5LHX3 300 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 NKX2-8O15522 239 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 ICAM4Q14773 271 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 ZNF56Q15929 161 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 ACSF3Q4G176 576 aaPredicted RBP10.25□□□□□ -0.77
SMG6-201ENST00000263073 PCSK4Q6UW60 755 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 OR51G1Q8NGK1 321 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 PEF1Q9UBV8 284 aaKnown RBP10.25□□□□□ -0.77
SMG6-201ENST00000263073 MAP1BP46821 2468 aaKnown RBP10.25□□□□□ -0.77
SMG6-201ENST00000263073 SCN8AQ9UQD0 1980 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 CD55P08174 381 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 C1QTNF9P0C862 333 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 ZNF414Q96IQ9 312 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 QSER1Q2KHR3 1735 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 A0A1B0GWB2 263 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 C17orf98A8MV24 154 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 MEIG1Q5JSS6 88 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 TMEM170BQ5T4T1 132 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 MIR17HGQ75NE6 70 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 MS4A5Q9H3V2 200 aa10.25□□□□□ -0.77
SMG6-201ENST00000263073 RP1L1Q8IWN7 2480 aaPredicted RBP10.25□□□□□ -0.77
SMG6-201ENST00000263073 H3BUT2 72 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 GREM1O60565 184 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 TIAF1O95411 115 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 UCP3P55916 312 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
SMG6-201ENST00000263073 NIT1Q86X76 327 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 RNF126Q9BV68 326 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 WBP1LQ9NX94 342 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 IL36BQ9NZH7 164 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 TMEM56-RWDD3S4R434 201 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 hCG_38984A0A1B0GV85 526 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 B4E171 279 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 C9JCJ5 164 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 GNG5P63218 68 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 CCL20P78556 96 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 APOMO95445 188 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 GLRX5Q86SX6 157 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 C1QL4Q86Z23 238 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 C9orf172C9J069 976 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 SS18L1O75177 396 aaPredicted RBP10.24□□□□□ -0.77
SMG6-201ENST00000263073 GPX1P07203 203 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 FAM214BQ7L5A3 538 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 MARS2Q96GW9 593 aaKnown RBP10.24□□□□□ -0.77
SMG6-201ENST00000263073 DERL1Q9BUN8 251 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 CCL21O00585 134 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.24□□□□□ -0.77
SMG6-201ENST00000263073 EBLN2Q6P2I7 272 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
SMG6-201ENST00000263073 M0R381 172 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 ZNF837Q96EG3 531 aaPredicted RBP10.23□□□□□ -0.77
SMG6-201ENST00000263073 REPIN1Q9BWE0 567 aaKnown RBP10.23□□□□□ -0.77
SMG6-201ENST00000263073 SPCS1Q9Y6A9 102 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 PPP1R17O96001 155 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 SLC25A45Q8N413 288 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 GCSAMQ8N6F7 178 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 NAA38Q9BRA0 125 aaKnown RBP10.23□□□□□ -0.77
SMG6-201ENST00000263073 DEFB104AQ8WTQ1 72 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 SDF2L1Q9HCN8 221 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 RFNGQ9Y644 331 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 CELA3AP09093 270 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 OR13C6PQ8NH95 151 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 GALNT14Q96FL9 552 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 NUDT11Q96G61 164 aa10.23□□□□□ -0.77
SMG6-201ENST00000263073 RFPL3SP0C7P2 107 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 RPL23P62829 140 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms