RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ZNF295-AS1Q8N0V1 137 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 SPTBN5Q9NRC6 3674 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 REV3LO60673 3130 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 LRRC30A6NM36 301 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 FOXH1O75593 365 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 RFPL3SP0C7P2 107 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 CRYGSP22914 178 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 RPL15P61313 204 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 UBE2V1Q13404 147 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 LEAP2Q969E1 77 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 RAB37Q96AX2 223 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 ETV2O00321 342 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 GPX1P07203 203 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 RAC1P63000 192 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 GAGE1Q13065 139 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 AMMECR1LQ6DCA0 310 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 PCSK4Q6UW60 755 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 TUSC5Q8IXB3 177 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 C11orf1Q9H5F2 150 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 ZNF355PQ9NSJ1 428 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 WDFY3Q8IZQ1 3526 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 PIGBOS1A0A0B4J2F0 54 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 TDGF1P13385 188 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 RPL8P62917 257 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 OCIAD1Q9NX40 245 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 IL36BQ9NZH7 164 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 TCFL5Q9UL49 500 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 C2orf16Q68DN1 1984 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 LIFP15018 202 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 SSTR5P35346 364 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 GPR12P47775 334 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 WNT9BO14905 357 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 IGLC2P0DOY2 106 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 IGLC3P0DOY3 106 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 CTSSP25774 331 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 TSPOP30536 169 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 PPOXP50336 477 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 RAC3P60763 192 aa13.38□□□□□ -0.27
PRPF40B-201ENST00000261897 EPOPA6NHQ4 379 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 PTGDSP41222 190 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 CCR5P51681 352 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 LINC00696Q6ZRV3 163 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 LHFPL4Q7Z7J7 247 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 NFAM1Q8NET5 270 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 GAL3ST2Q9H3Q3 398 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 CHCHD2Q9Y6H1 151 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 UBE2NP61088 152 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 RPL24P83731 157 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 CEACAM21Q3KPI0 293 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 TEX43Q6ZNM6 134 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 RABEPKQ7Z6M1 372 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 TMEM54Q969K7 222 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 AGMATQ9BSE5 352 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 SEPSECSQ9HD40 501 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 CA7P43166 264 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 PDLIM4P50479 330 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 CLEC7AQ9BXN2 247 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 MS4A5Q9H3V2 200 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 KCNIP2Q9NS61 270 aa13.37□□□□□ -0.27
PRPF40B-201ENST00000261897 hDV102S1A0JD36 115 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 OR2T8A6NH00 312 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 ZNF891A8MT65 544 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 H3BTX0 84 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 CCL7P80098 99 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 WFDC8Q8IUA0 241 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 IL36GQ9NZH8 169 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 YTHDF2Q9Y5A9 579 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 IGHV1OR15-9A0A0B4J2B8 117 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 NKX6-3A6NJ46 265 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 CXorf1O96002 111 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 LSM10Q969L4 123 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 BMPR1BO00238 502 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 ZNF83P51522 516 aa13.36□□□□□ -0.27
PRPF40B-201ENST00000261897 GOSR1O95249 250 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 ARG2P78540 354 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 BLNKQ8WV28 456 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 COX11Q9Y6N1 276 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 PLXNB1O43157 2135 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 GCHFRP30047 84 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 SPINK14Q6IE38 97 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 OR8B3Q8NGG8 313 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 DNASE2BQ8WZ79 361 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 GMPPAQ96IJ6 420 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 LINC00479Q96M42 142 aa13.35□□□□□ -0.27
PRPF40B-201ENST00000261897 A0A1W2PS18 150 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 NDUFB8O95169 186 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 CA2P00918 260 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 SELENOTP62341 195 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 RHOBP62745 196 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 SPINT2O43291 252 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 HBZP02008 142 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 WNT2P09544 360 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 FOXL1Q12952 345 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 FBXW9Q5XUX1 488 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 KCNS1Q96KK3 526 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 MEGF9Q9H1U4 602 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 TP53TG3Q9ULZ0 132 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms