RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 TEX38Q6PEX7 206 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 CTSSP25774 331 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 TMEM45BQ96B21 275 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 ACACAQ13085 2346 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 CSRP1P21291 193 aaKnown RBP13.74□□□□□ -0.21
SREBF1-201ENST00000261646 RND2P52198 227 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 HSPB8Q9UJY1 196 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 IGKV1-27A0A075B6S5 117 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 TRBV9A0A0B4J1U6 114 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 NMSQ5H8A3 153 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 GCSAMLQ5JQS6 135 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 DNLZQ5SXM8 178 aa13.74□□□□□ -0.21
SREBF1-201ENST00000261646 C1orf147Q96MC9 270 aaPredicted RBP13.74□□□□□ -0.21
SREBF1-201ENST00000261646 A0A1W2PR77 199 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 MAS1LP35410 378 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 RNF166Q96A37 237 aaPredicted RBP13.73□□□□□ -0.21
SREBF1-201ENST00000261646 DECR2Q9NUI1 292 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 C17orf98A8MV24 154 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 HES1Q14469 280 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 OCC1Q8TAD7 63 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 A0A1W2PQM1 296 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 MKRN2OSH3BPM6 223 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 CGAP01215 116 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 C10orf113Q5VZT2 155 aa13.73□□□□□ -0.21
SREBF1-201ENST00000261646 FER1L5A0AVI2 2057 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 COMPP49747 757 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-201ENST00000261646 RELBQ01201 579 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 RAB37Q96AX2 223 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 PAXXQ9BUH6 204 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 ARRDC1-AS1Q9H2J1 176 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 PRNDQ9UKY0 176 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 TCF19Q9Y242 345 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 A0A1B0GUS0 222 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 CORTO00230 105 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 RBP4P02753 201 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 STPG3Q8N7X2 389 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 ADTRPQ96IZ2 230 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 PCNX1Q96RV3 2341 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 A8MWL6 223 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 SFTPCP11686 197 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 MEOX1P50221 254 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 PKIBQ9C010 78 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 ZNF355PQ9NSJ1 428 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 PRSS1P07477 247 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 IL15RAQ13261 267 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 RND1Q92730 232 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 TCFL5Q9UL49 500 aa13.72□□□□□ -0.21
SREBF1-201ENST00000261646 CHCHD2Q9Y6H1 151 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-201ENST00000261646 CLPSP04118 112 aa13.71□□□□□ -0.21
SREBF1-201ENST00000261646 ZNF324BQ6AW86 544 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-201ENST00000261646 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
SREBF1-201ENST00000261646 TMEM140Q9NV12 185 aa13.71□□□□□ -0.21
SREBF1-201ENST00000261646 PROCRQ9UNN8 238 aa13.71□□□□□ -0.21
SREBF1-201ENST00000261646 OR51B2Q9Y5P1 312 aa13.71□□□□□ -0.21
SREBF1-201ENST00000261646 SSTR5P35346 364 aa13.71□□□□□ -0.21
SREBF1-201ENST00000261646 VMA21Q3ZAQ7 101 aa13.71□□□□□ -0.21
SREBF1-201ENST00000261646 PPIHO43447 177 aaKnown RBP13.71□□□□□ -0.22
SREBF1-201ENST00000261646 AGFG2O95081 481 aa13.71□□□□□ -0.22
SREBF1-201ENST00000261646 CA2P00918 260 aa13.71□□□□□ -0.22
SREBF1-201ENST00000261646 LINC00869P0C866 280 aa13.71□□□□□ -0.22
SREBF1-201ENST00000261646 BTF3P20290 206 aaKnown RBP13.71□□□□□ -0.22
SREBF1-201ENST00000261646 ZNF83P51522 516 aa13.71□□□□□ -0.22
SREBF1-201ENST00000261646 GNB2P62879 340 aa13.71□□□□□ -0.22
SREBF1-201ENST00000261646 NABP2Q9BQ15 211 aa13.71□□□□□ -0.22
SREBF1-201ENST00000261646 LIME1Q9H400 295 aa13.71□□□□□ -0.22
SREBF1-201ENST00000261646 PKDREJQ9NTG1 2253 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 DENND4CQ5VZ89 1909 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 TMEM50AO95807 157 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 MT-CO3P00414 261 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 LINC01551Q86U37 167 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 DMRTC2Q8IXT2 367 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-201ENST00000261646 PNRC2Q9NPJ4 139 aaKnown RBP13.7□□□□□ -0.22
SREBF1-201ENST00000261646 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-201ENST00000261646 ZNF407Q9C0G0 2248 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 IGHV3OR15-7A0A075B7D8 119 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 PFN1P07737 140 aaKnown RBP13.7□□□□□ -0.22
SREBF1-201ENST00000261646 DHRS13Q6UX07 377 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 C5orf42Q9H799 3197 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 SNAI2O43623 268 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 LINC00614P0C842 121 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 NMUP48645 174 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 LYZP61626 148 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 FBXW9Q5XUX1 488 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 UNQ6494/PRO21346Q6UXR6 183 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 TMEM70Q9BUB7 260 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 RNASE7Q9H1E1 156 aaKnown RBP13.7□□□□□ -0.22
SREBF1-201ENST00000261646 WDR54Q9H977 334 aa13.7□□□□□ -0.22
SREBF1-201ENST00000261646 ZNF207O43670 478 aaKnown RBP13.69□□□□□ -0.22
SREBF1-201ENST00000261646 OR2J3O76001 311 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 APELAP0DMC3 54 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 SELLP14151 372 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 PRDX2P32119 198 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 KLF3P57682 345 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-201ENST00000261646 PLP1P60201 277 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 SSPNQ14714 243 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 PLA2G2EQ9NZK7 142 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 A0A0G2JRQ6 117 aa13.69□□□□□ -0.22
SREBF1-201ENST00000261646 C12orf77C9JDV5 145 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms