RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZNF645Q8N7E2 425 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 C11orf1Q9H5F2 150 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 LAMP3Q9UQV4 416 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 SRRM5B3KS81 715 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 LY6HO94772 140 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 TNFSF4P23510 183 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 COL8A2P25067 703 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 ZNF134P52741 427 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 CATR1Q13166 79 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 LY6DQ14210 128 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 SLC35E4Q6ICL7 350 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 RNF7Q9UBF6 113 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 A0A0U1RQK1 487 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 PLAUP00749 431 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 PAX9P55771 341 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 FAM90A2PQ658T7 463 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 DYSFO75923 2080 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 A0A1W2PPQ1 181 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 MMP23AO75900 390 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 MBP02144 154 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 HNF1AP20823 631 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 NHLH1Q02575 133 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 PPP1R35Q8TAP8 253 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 HES4Q9HCC6 221 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 A0A087WWC5 75 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 TSTD3H0UI37 97 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 CEACAM8P31997 349 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 PRAMEF5Q5TYX0 476 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 SAP30LQ9HAJ7 183 aa12.14□□□□□ -0.47
TRAFD1-201ENST00000257604 MYOD1P15172 320 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 CCL3L1P16619 93 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 ATP5SQ99766 215 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 RBKSQ9H477 322 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 TRBV6-6A0A0A6YYG2 114 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 LOC102723971A0A1B0GUV8 181 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 CLDN34H7C241 214 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 ZNF737O75373 536 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 ETFRF1Q6IPR1 90 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 SMDT1Q9H4I9 107 aa12.13□□□□□ -0.47
TRAFD1-201ENST00000257604 K7ENP7 123 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 CCL21O00585 134 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 TAS2R30P59541 319 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 SDSLQ96GA7 329 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 CALYQ9NYX4 217 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 A0A1B0GU03 582 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 MGST3O14880 152 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 ZNF726P1Q15940 193 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 SLC25A22Q9H936 323 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 SIRT7Q9NRC8 400 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 MARCH11A6NNE9 402 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 IFNA10P01566 189 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 TDGF1P3P51864 188 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 PKIAP61925 76 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 ADIPOQQ15848 244 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 REC114Q7Z4M0 266 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 OR4X1Q8NH49 305 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 RNF115Q9Y4L5 304 aa12.12□□□□□ -0.47
TRAFD1-201ENST00000257604 HCFC1P51610 2035 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 RNF212BA8MTL3 300 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 ZNF66Q6ZN08 573 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 R3HDM4Q96D70 268 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 THBDP07204 575 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 BAXQ07812 192 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 MORN2Q502X0 79 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 OR4C12Q96R67 309 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 PCGF1Q9BSM1 259 aa12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-201ENST00000257604 TRGV10A0A0A0MS01 117 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 BCL2P10415 239 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 FAM3BP58499 235 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 BRWD1-AS2P59051 145 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 RBPJQ06330 500 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 MAJINQ3KP22 176 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 HBE1P02100 147 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 GZMHP20718 246 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 C1orf229Q6ZS94 237 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 SMIM7Q9BQ49 75 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 ELOA3CA0A087WX78 387 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 EREGO14944 169 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 PROP1O75360 226 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 APELAP0DMC3 54 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 CHRNA7P36544 502 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 TNFRSF9Q07011 255 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 SLC38A11Q08AI6 406 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 MSMO1Q15800 293 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 C16orf82Q7Z2V1 217 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 ZNF664Q8N3J9 261 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 S1PR3Q99500 378 aa12.1□□□□□ -0.47
TRAFD1-201ENST00000257604 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms