RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 CACNA1AO00555 2505 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 IGHV3OR16-10A0A075B7F0 116 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 F8VVB4 439 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 F8VWA3 439 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 TDGF1P13385 188 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 RANP62826 216 aaKnown RBP14.3□□□□□ -0.12
ACTN4-201ENST00000252699 TMEM42Q69YG0 159 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 C16orf82Q7Z2V1 217 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 OSR1Q8TAX0 266 aaPredicted RBP14.3□□□□□ -0.12
ACTN4-201ENST00000252699 PAXXQ9BUH6 204 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 HELTA6NFD8 242 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 HGFACQ04756 655 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 TUSC1Q2TAM9 212 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 MBNL2Q5VZF2 373 aaKnown RBP14.3□□□□□ -0.12
ACTN4-201ENST00000252699 ZGRF1Q86YA3 2104 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.3□□□□□ -0.12
ACTN4-201ENST00000252699 SRRM5B3KS81 715 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 K7ENP7 123 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 LILRA1O75019 489 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 ZNF474Q6S9Z5 364 aaPredicted RBP14.3□□□□□ -0.12
ACTN4-201ENST00000252699 TMEM204Q9BSN7 226 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 SH3BGRL3Q9H299 93 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 PPOXP50336 477 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 CBLN4Q9NTU7 201 aa14.3□□□□□ -0.12
ACTN4-201ENST00000252699 PLAUP00749 431 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 PF4V1P10720 104 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 ZNF146Q15072 292 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-201ENST00000252699 CLEC5AQ9NY25 188 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 OR4A5Q8NH83 315 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 COL25A1Q9BXS0 654 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-201ENST00000252699 NIT2Q9NQR4 276 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 AURKAIP1Q9NWT8 199 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-201ENST00000252699 DOPEY2Q9Y3R5 2298 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 IGSF23A1L1A6 192 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 EIF3GO75821 320 aaKnown RBP eCLIP14.29□□□□□ -0.124e-7■□□□□ 10.8
ACTN4-201ENST00000252699 CYB561D1Q8N8Q1 229 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 PITPNC1Q9UKF7 332 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 ERVH48-1M5A8F1 160 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 IGHV3-48P01763 117 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 PRO3102Q9H379 93 aa14.29□□□□□ -0.12
ACTN4-201ENST00000252699 SRSF10O75494 262 aaKnown RBP14.28□□□□□ -0.12
ACTN4-201ENST00000252699 SIGLECL1Q8N7X8 197 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 OR2T10Q8NGZ9 312 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 GTF3C1Q12789 2109 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 COMPP49747 757 aaPredicted RBP14.28□□□□□ -0.12
ACTN4-201ENST00000252699 FAM74A3Q4VXF1 159 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 RAB24Q969Q5 203 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 TMEM18Q96B42 140 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 RBM14Q96PK6 669 aaKnown RBP14.28□□□□□ -0.12
ACTN4-201ENST00000252699 FAM103A1Q9BTL3 118 aaKnown RBP14.28□□□□□ -0.12
ACTN4-201ENST00000252699 SMDT1Q9H4I9 107 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 TCL1AP56279 114 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 LY6EQ16553 131 aa14.28□□□□□ -0.12
ACTN4-201ENST00000252699 E9PQ18 207 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 YPEL1O60688 119 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 YPEL2Q96QA6 119 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 ZNF586Q9NXT0 402 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 PLXNB3Q9ULL4 1909 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 HSBP1O75506 76 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 F12P00748 615 aaPredicted RBP14.27□□□□□ -0.12
ACTN4-201ENST00000252699 FXYD3Q14802 87 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 NHLRC3Q5JS37 347 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 SIGIRRQ6IA17 410 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 FAM168AQ92567 244 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 OTOGLQ3ZCN5 2332 aa14.27□□□□□ -0.12
ACTN4-201ENST00000252699 FCN1O00602 326 aa14.27□□□□□ -0.13
ACTN4-201ENST00000252699 CAMPP49913 170 aa14.27□□□□□ -0.13
ACTN4-201ENST00000252699 FAM162BQ5T6X4 162 aa14.27□□□□□ -0.13
ACTN4-201ENST00000252699 OR4A47Q6IF82 309 aa14.27□□□□□ -0.13
ACTN4-201ENST00000252699 MRPL20Q9BYC9 149 aaKnown RBP14.27□□□□□ -0.13
ACTN4-201ENST00000252699 PIEZO1Q92508 2521 aa14.27□□□□□ -0.13
ACTN4-201ENST00000252699 B4DEV8 164 aa14.27□□□□□ -0.13
ACTN4-201ENST00000252699 TMEM56-RWDD3S4R434 201 aa14.27□□□□□ -0.13
ACTN4-201ENST00000252699 PSPNO60542 156 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 SELLP14151 372 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 MPZP25189 248 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 FHITP49789 147 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 RPEL1Q2QD12 228 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 SLC16A13Q7RTY0 426 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 RD3LP0DJH9 198 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 MEF2BQ02080 365 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-201ENST00000252699 MORN2Q502X0 79 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 WDR31Q8NA23 367 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 OR5AU1Q8NGC0 362 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 NAGKQ9UJ70 344 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 LOXL3P58215 753 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 NPIPB3Q92617 1050 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 FBXL15Q9H469 300 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 CA2P00918 260 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 SMIM17P0DL12 118 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 PAX6P26367 422 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 IGFL3Q6UXB1 125 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 PQLC2Q6ZP29 291 aa14.26□□□□□ -0.13
ACTN4-201ENST00000252699 COL8A1P27658 744 aa14.25□□□□□ -0.13
ACTN4-201ENST00000252699 PRR30Q53SZ7 412 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-201ENST00000252699 LDLRAD3Q86YD5 345 aa14.25□□□□□ -0.13
ACTN4-201ENST00000252699 SIGLEC5O15389 551 aa14.25□□□□□ -0.13
ACTN4-201ENST00000252699 PRB3Q04118 309 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-201ENST00000252699 LAMTOR1Q6IAA8 161 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms