RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TMEM167AQ8TBQ9 72 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 CACNG5Q9UF02 275 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 PITPNC1Q9UKF7 332 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 ZANQ9Y493 2812 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 A0A0U1RQK1 487 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 MPTX1A8MV57 137 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 UPK2O00526 184 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 MED6O75586 246 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 KBTBD11O94819 623 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 SIX6O95475 246 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 IGKV1D-33P01593 117 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 IGKV1-33P01594 117 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 IGLV2-23P01705 113 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 C1QBP02746 253 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 RLN2P04090 185 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 CRYGBP07316 175 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
LSM8-201ENST00000249299 LRRC75BQ2VPJ9 315 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 RUSC1-AS1Q66K80 236 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 BRD3OSQ6XYD6 125 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 C16orf82Q7Z2V1 217 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 OR5B3Q8NH48 314 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 OR4A16Q8NH70 328 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 OR5R1Q8NH85 324 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 PPP1R1CQ8WVI7 109 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 C17orf50Q8WW18 174 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 EAF1Q96JC9 268 aaPredicted RBP10.37□□□□□ -0.75
LSM8-201ENST00000249299 TMEM14BQ9NUH8 114 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 GSKIPQ9P0R6 139 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 FOXA2Q9Y261 457 aaPredicted RBP10.37□□□□□ -0.75
LSM8-201ENST00000249299 POMT1Q9Y6A1 747 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 OTOGQ6ZRI0 2925 aa10.37□□□□□ -0.75
LSM8-201ENST00000249299 IGHV3-72A0A0B4J1Y9 119 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 A0A0G2JRQ6 117 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 C15orf61A6NNL5 157 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 RRHO14718 337 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 NBR2O15453 112 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 MPC2O95563 127 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 SNRNP70P08621 437 aaKnown RBP10.36□□□□□ -0.75
LSM8-201ENST00000249299 SLC25A4P12235 298 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 LYL1P12980 280 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 NKX2-1P43699 371 aaPredicted RBP10.36□□□□□ -0.75
LSM8-201ENST00000249299 SPCS3P61009 180 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 PSG5Q15238 335 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 TMEM65Q6PI78 240 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 Q6ZRM9 215 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 MMD2Q8IY49 270 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 OR1S1Q8NH92 325 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 HYLS1Q96M11 299 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 CHIAQ9BZP6 476 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 KIAA1456Q9P272 454 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 HSPB7Q9UBY9 170 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 SIGLEC9Q9Y336 463 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 AKAP9Q99996 3911 aa10.36□□□□□ -0.75
LSM8-201ENST00000249299 HMSDA8MTL9 139 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 INS-IGF2F8WCM5 200 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 M0QZK8 103 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 FGF16O43320 207 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
LSM8-201ENST00000249299 PVALBP20472 110 aaPredicted RBP10.35□□□□□ -0.75
LSM8-201ENST00000249299 ATP5IP56385 69 aaPredicted RBP10.35□□□□□ -0.75
LSM8-201ENST00000249299 TAS2R30P59541 319 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 RPL8P62917 257 aaKnown RBP10.35□□□□□ -0.75
LSM8-201ENST00000249299 FAM120AOSQ5T036 256 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 PPP1R27Q86WC6 154 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 THAP6Q8TBB0 222 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 CIB3Q96Q77 187 aaPredicted RBP10.35□□□□□ -0.75
LSM8-201ENST00000249299 RAB40CQ96S21 281 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 SRSF8Q9BRL6 282 aaKnown RBP10.35□□□□□ -0.75
LSM8-201ENST00000249299 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 TEX15Q9BXT5 2789 aa10.35□□□□□ -0.75
LSM8-201ENST00000249299 IGHV3OR16-10A0A075B7F0 116 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 RBMXL2O75526 392 aaKnown RBP10.34□□□□□ -0.75
LSM8-201ENST00000249299 DEDDO75618 318 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 OR2F2O95006 317 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 OR9G9P0C7N8 305 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 CD99P14209 185 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 TMEM11P17152 192 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 HSPE1P61604 102 aaKnown RBP10.34□□□□□ -0.75
LSM8-201ENST00000249299 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 HES1Q14469 280 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 MMDQ15546 238 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 PRSS8Q16651 343 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 C5orf64Q2M2E5 130 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 ZFP69Q49AA0 526 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 C11orf87Q6NUJ2 197 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 PRSS54Q6PEW0 395 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 SSX9Q7RTT3 188 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 HSD17B13Q7Z5P4 300 aaPredicted RBP10.34□□□□□ -0.75
LSM8-201ENST00000249299 MRPL41Q8IXM3 137 aaKnown RBP10.34□□□□□ -0.75
LSM8-201ENST00000249299 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 PIFOQ8TCI5 191 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 RBM14Q96PK6 669 aaKnown RBP10.34□□□□□ -0.75
LSM8-201ENST00000249299 SSX3Q99909 188 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 YAE1D1Q9NRH1 226 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 PLSCR3Q9NRY6 295 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 NAV3Q8IVL0 2385 aa10.34□□□□□ -0.75
LSM8-201ENST00000249299 E5RGE8 158 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms