RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ACOT6Q3I5F7 207 aaPredicted RBP21.11■□□□□ 0.97
RAB40C-201ENST00000248139 TREML4Q6UXN2 200 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 SNRNP40Q96DI7 357 aaKnown RBP21.11■□□□□ 0.97
RAB40C-201ENST00000248139 MANBALQ9NQG1 85 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 TMEM140Q9NV12 185 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 MGST3O14880 152 aa21.1■□□□□ 0.97
RAB40C-201ENST00000248139 NDUFB4O95168 129 aa21.1■□□□□ 0.97
RAB40C-201ENST00000248139 GNB1P62873 340 aa21.1■□□□□ 0.97
RAB40C-201ENST00000248139 PIP4P1Q86T03 277 aa21.1■□□□□ 0.97
RAB40C-201ENST00000248139 ZNF114Q8NC26 417 aa21.1■□□□□ 0.97
RAB40C-201ENST00000248139 TMEM37Q8WXS4 190 aa21.1■□□□□ 0.97
RAB40C-201ENST00000248139 S1PR3Q99500 378 aa21.1■□□□□ 0.97
RAB40C-201ENST00000248139 A0A1W2PPV4 95 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 RELBQ01201 579 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 TCTEX1D1Q8N7M0 179 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 OR5B12Q96R08 314 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 MGST2Q99735 147 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 HIST1H2BLQ99880 126 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 HINT2Q9BX68 163 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 DCAF16Q9NXF7 216 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 CALYQ9NYX4 217 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 ZFHX2Q9C0A1 2572 aaPredicted RBP21.09■□□□□ 0.97
RAB40C-201ENST00000248139 GAMTQ14353 236 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 PFDN5Q99471 154 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 GFOD1Q9NXC2 390 aa21.09■□□□□ 0.97
RAB40C-201ENST00000248139 AHRRA9YTQ3 701 aa21.08■□□□□ 0.97
RAB40C-201ENST00000248139 GFRA3O60609 400 aa21.08■□□□□ 0.97
RAB40C-201ENST00000248139 CT45A1Q5HYN5 189 aa21.08■□□□□ 0.97
RAB40C-201ENST00000248139 CT45A3Q8NHU0 189 aa21.08■□□□□ 0.97
RAB40C-201ENST00000248139 SRD5A3Q9H8P0 318 aa21.08■□□□□ 0.97
RAB40C-201ENST00000248139 JPT1Q9UK76 154 aa21.08■□□□□ 0.97
RAB40C-201ENST00000248139 VDAC2P45880 294 aaPredicted RBP21.08■□□□□ 0.96
RAB40C-201ENST00000248139 GNG10P50151 68 aa21.08■□□□□ 0.96
RAB40C-201ENST00000248139 SPCS3P61009 180 aa21.08■□□□□ 0.96
RAB40C-201ENST00000248139 PACRGQ96M98 296 aaPredicted RBP21.08■□□□□ 0.96
RAB40C-201ENST00000248139 YPEL1O60688 119 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 FAM122AQ96E09 287 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 RHOVQ96L33 236 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 YPEL2Q96QA6 119 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 PRDM13Q9H4Q3 707 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 DMRT1Q9Y5R6 373 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 PPP5D1E7EU14 171 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 C1QTNF9P0C862 333 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 ARL14EPLP0DKL9 152 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 ERVK-16P61578 105 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 C1orf159Q96HA4 380 aa21.07■□□□□ 0.96
RAB40C-201ENST00000248139 C17orf58Q2M2W7 97 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 SPATA31B1PQ5VZV4 182 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 PRO1933Q9H354 126 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 FUT9Q9Y231 359 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 TCF19Q9Y242 345 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 ELOA3CA0A087WX78 387 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-201ENST00000248139 K7EM74 188 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 KLF3P57682 345 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-201ENST00000248139 PDLIM3Q53GG5 364 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-201ENST00000248139 PXMP4Q9Y6I8 212 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 PKDREJQ9NTG1 2253 aa21.06■□□□□ 0.96
RAB40C-201ENST00000248139 MMP23AO75900 390 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 LYG1Q8N1E2 194 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 ZNF292O60281 2723 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 SAA2-SAA4A0A096LPE2 208 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 SAA2P0DJI9 122 aaPredicted RBP21.05■□□□□ 0.96
RAB40C-201ENST00000248139 TRAT1Q6PIZ9 186 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 WFIKKN1Q96NZ8 548 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 PYGO2Q9BRQ0 406 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 GGTLC1Q9BX51 225 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 FAM215AQ9Y5M1 114 aa21.05■□□□□ 0.96
RAB40C-201ENST00000248139 ANKRD11Q6UB99 2663 aaPredicted RBP21.05■□□□□ 0.96
RAB40C-201ENST00000248139 HRASP01112 189 aa21.04■□□□□ 0.96
RAB40C-201ENST00000248139 FAM78BQ5VT40 261 aa21.04■□□□□ 0.96
RAB40C-201ENST00000248139 FAM27E3Q08E93 113 aa21.04■□□□□ 0.96
RAB40C-201ENST00000248139 A0A1B0GWJ7 208 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 XKRY2A2RUG3 117 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 PRSS46E5RG02 174 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 LINC01551Q86U37 167 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 CCL13Q99616 98 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 TRBV20OR9-2A0A075B6H5 130 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 A0A0U1RQK1 487 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 F2RL2O00254 374 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 ARSJQ5FYB0 599 aaPredicted RBP21.03■□□□□ 0.96
RAB40C-201ENST00000248139 PPP1R35Q8TAP8 253 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 SEPSECSQ9HD40 501 aaKnown RBP21.03■□□□□ 0.96
RAB40C-201ENST00000248139 PITPNC1Q9UKF7 332 aa21.03■□□□□ 0.96
RAB40C-201ENST00000248139 UNQ6494/PRO21346Q6UXR6 183 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 MOB3BQ86TA1 216 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 ZCCHC24Q8N2G6 241 aaKnown RBP21.02■□□□□ 0.96
RAB40C-201ENST00000248139 FAM216BQ8N7L0 139 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 OR2T10Q8NGZ9 312 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 DSCAML1Q8TD84 2053 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 MBD3L4A6NDZ8 208 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-201ENST00000248139 MBD3L3A6NE82 208 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-201ENST00000248139 MBD3L5A6NJ08 208 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-201ENST00000248139 FOXH1O75593 365 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 OR4A47Q6IF82 309 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 MBD3L2Q8NHZ7 208 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-201ENST00000248139 DDB2Q92466 427 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 DIRC2Q96SL1 478 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 TUBG2Q9NRH3 451 aa21.02■□□□□ 0.96
RAB40C-201ENST00000248139 SCO2A0A1W2PP80 73 aa21.01■□□□□ 0.95
RAB40C-201ENST00000248139 RBFOX2O43251 390 aaKnown RBP eCLIP21.01■□□□□ 0.952e-11■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms