RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 NR2C2APQ86WQ0 139 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 OR4D5Q8NGN0 318 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 OR10AG1Q8NH19 301 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 SCN4AP35499 1836 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 PILRBQ9UKJ0 227 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 RAXQ9Y2V3 346 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 C19orf54Q5BKX5 351 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 ST6GALNAC6Q969X2 333 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 IGHV3OR16-10A0A075B7F0 116 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 BTCP35070 178 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 PTGDSP41222 190 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 SCARF2Q96GP6 870 aaPredicted RBP11.36□□□□□ -0.59
NEK4-201ENST00000233027 CARHSP1Q9Y2V2 147 aaKnown RBP11.36□□□□□ -0.59
NEK4-201ENST00000233027 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 RBFOX2O43251 390 aaKnown RBP eCLIP11.36□□□□□ -0.59
NEK4-201ENST00000233027 SNAI2O43623 268 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 RIPPLY2Q5TAB7 128 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 LGALS3P17931 250 aaKnown RBP11.36□□□□□ -0.59
NEK4-201ENST00000233027 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 FOXJ2Q9P0K8 574 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 CTSSP25774 331 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 ATP5G3P48201 142 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 MUC21Q5SSG8 566 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 SPSB2Q99619 263 aa11.36□□□□□ -0.59
NEK4-201ENST00000233027 IGHV3OR16-13A0A075B7E8 117 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 IGHV3-74A0A0B4J1X5 117 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 A8MXK9 166 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 ACSF3Q4G176 576 aaPredicted RBP11.35□□□□□ -0.59
NEK4-201ENST00000233027 STPG1Q5TH74 334 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 FAM74A4Q5TZK3 123 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 C14orf144Q96I85 54 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 SYNGR3O43761 229 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 COX5BP10606 129 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 IGFBP2P18065 325 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 CYP2G1PQ6ZSU1 146 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 PSMG3Q9BT73 122 aaPredicted RBP11.35□□□□□ -0.59
NEK4-201ENST00000233027 NRXN2Q9P2S2 1712 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 SRP19P09132 144 aaKnown RBP11.35□□□□□ -0.59
NEK4-201ENST00000233027 FAM201AQ5SY85 155 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 GSN-AS1Q9NRJ2 163 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 FOXI3A8MTJ6 420 aaPredicted RBP11.35□□□□□ -0.59
NEK4-201ENST00000233027 C17orf98A8MV24 154 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 LEMD1Q68G75 181 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 PNKDQ8N490 385 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 GPR82Q96P67 336 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 TM2D1Q9BX74 207 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 MRPL32Q9BYC8 188 aaKnown RBP11.35□□□□□ -0.59
NEK4-201ENST00000233027 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 AMMECR1LQ6DCA0 310 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 SIGLEC12Q96PQ1 595 aa11.35□□□□□ -0.59
NEK4-201ENST00000233027 C19orf48Q6RUI8 117 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 C18orf15Q96N68 181 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 A0A0G2JMM0 328 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 A0A1W2PPB8 328 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 A0A1W2PRS3 328 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 KIR3DP1A8MWS1 328 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 IL4P05112 153 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 HBBP68871 147 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 CHCHD2Q9Y6H1 151 aaPredicted RBP11.34□□□□□ -0.59
NEK4-201ENST00000233027 A0A1W2PS18 150 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 DPRXA6NFQ7 191 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 GPX1P07203 203 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 LCN2P80188 198 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 SHISA5Q8N114 240 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 ZNF729A6NN14 1252 aaPredicted RBP11.34□□□□□ -0.59
NEK4-201ENST00000233027 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 BEX4Q9NWD9 120 aaPredicted RBP11.34□□□□□ -0.59
NEK4-201ENST00000233027 TMEM160Q9NX00 188 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 TDRD6O60522 2096 aaKnown RBP11.34□□□□□ -0.59
NEK4-201ENST00000233027 PRSS2P07478 247 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 ZNF837Q96EG3 531 aaPredicted RBP11.34□□□□□ -0.59
NEK4-201ENST00000233027 TIMP4Q99727 224 aa11.34□□□□□ -0.59
NEK4-201ENST00000233027 LNP1A1A4G5 178 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 RPS20P60866 119 aaKnown RBP11.33□□□□□ -0.6
NEK4-201ENST00000233027 ACP7Q6ZNF0 438 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 OR9G1Q8NH87 305 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 TBL2Q9Y4P3 447 aaKnown RBP11.33□□□□□ -0.6
NEK4-201ENST00000233027 ATP5G2Q06055 141 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 WDYHV1Q96HA8 205 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 COX6CP09669 75 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 ICAM4Q14773 271 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 CLDND2Q8NHS1 167 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
NEK4-201ENST00000233027 DCTN5Q9BTE1 182 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 IL36BQ9NZH7 164 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 IGKV3OR2-268A0A0C4DH90 116 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 SCGB1A1P11684 91 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 TAS2R60P59551 318 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms