RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TECRQ9NZ01 308 aaKnown RBP7.05□□□□□ -1.28
SPARC-201ENST00000231061 ATG2AQ2TAZ0 1938 aa7.05□□□□□ -1.28
SPARC-201ENST00000231061 A0A0U1RQV1 116 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 CD34P28906 385 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 LINC01620Q4KN68 170 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 FAM159AQ6UWV7 190 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.04□□□□□ -1.28
SPARC-201ENST00000231061 TEX29Q8N6K0 151 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 CDX2Q99626 313 aaPredicted RBP7.04□□□□□ -1.28
SPARC-201ENST00000231061 HSPB9Q9BQS6 159 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 SLC25A39Q9BZJ4 359 aaPredicted RBP7.04□□□□□ -1.28
SPARC-201ENST00000231061 OR2H1Q9GZK4 316 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 FBXL15Q9H469 300 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 ZNF736B4DX44 427 aaPredicted RBP7.04□□□□□ -1.28
SPARC-201ENST00000231061 TEX22C9J3V5 150 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 C1orf140Q5VVS0 124 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 C11orf87Q6NUJ2 197 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 RBMXL3Q8N7X1 1067 aaKnown RBP7.04□□□□□ -1.28
SPARC-201ENST00000231061 OR4B1Q8NGF8 309 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 COMMD9Q9P000 198 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 LOC107986453A0A1B0GWG9 222 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 TLCD2A6NGC4 264 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 M0R1X1 148 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 KIR2DL2P43627 348 aaPredicted RBP7.04□□□□□ -1.28
SPARC-201ENST00000231061 MTCP1P56278 107 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 ZNF92Q03936 586 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 FMODQ06828 376 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 ACOT6Q3I5F7 207 aaPredicted RBP7.04□□□□□ -1.28
SPARC-201ENST00000231061 MPV17L2Q567V2 206 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 ZNF584Q8IVC4 421 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 Q96MF0 132 aa7.04□□□□□ -1.28
SPARC-201ENST00000231061 EP300Q09472 2414 aaPredicted RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 CRYAAP02489 173 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 NHLRC4P0CG21 123 aaPredicted RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 C9orf40Q8IXQ3 194 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 GMPPAQ96IJ6 420 aaPredicted RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 TMEM126AQ9H061 195 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 PNRC2Q9NPJ4 139 aaKnown RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 CISD1Q9NZ45 108 aaKnown RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 C1RLQ9NZP8 487 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 ZNF581Q9P0T4 197 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 PRNDQ9UKY0 176 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 USP34Q70CQ2 3546 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 DUXBA0A1W2PPF3 345 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 LMX1BO60663 402 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 PMS2P2O95744 297 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 TMEM225BP0DP42 221 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 HLA-DOBP13765 273 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 ADMP35318 185 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 GPM6AP51674 278 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 LCN15Q6UWW0 184 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 OR52N5Q8NH56 324 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 ZNF721Q8TF20 911 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 GGTLC1Q9BX51 225 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 TRGV10A0A0A0MS01 117 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 IGLV1-36A0A0B4J1U3 117 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 IGHV3-20A0A0C4DH32 117 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 FAM231BA6NCW3 169 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 H2BFMP0C1H6 154 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 ZNF728P0DKX0 622 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 CSRP1P21291 193 aaKnown RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 GRB2P62993 217 aaKnown RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 EWSR1Q01844 656 aaKnown RBP eCLIP7.03□□□□□ -1.28
SPARC-201ENST00000231061 C16orf47Q6ZP98 133 aaPredicted RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 LINC00336Q6ZUF6 198 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 TDHQ8IZJ6 230 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 SPEM1Q8N4L4 309 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 C8orf31Q8N9H6 132 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 OR10S1Q8NGN2 331 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 OR4F5Q8NH21 305 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 RTBDNQ9BSG5 229 aaPredicted RBP7.03□□□□□ -1.28
SPARC-201ENST00000231061 FUT9Q9Y231 359 aa7.03□□□□□ -1.28
SPARC-201ENST00000231061 EML5Q05BV3 1969 aa7.02□□□□□ -1.28
SPARC-201ENST00000231061 MOSP00540 346 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 MALP21145 153 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 TMEM229BQ8NBD8 167 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 POLR1DQ9Y2S0 133 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 LILRA5A6NI73 299 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 FAM166BA8MTA8 275 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 J3QR06 171 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 EFNA2O43921 213 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 POU3F1Q03052 451 aaPredicted RBP7.02□□□□□ -1.29
SPARC-201ENST00000231061 MST1LQ2TV78 715 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 MUC21Q5SSG8 566 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 DNM1P46Q6ZS02 220 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 TRAPPC6BQ86SZ2 158 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 KCNRGQ8N5I3 272 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 C8orf44Q96CB5 159 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 TMEM106BQ9NUM4 274 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 MRPS16Q9Y3D3 137 aaKnown RBP7.02□□□□□ -1.29
SPARC-201ENST00000231061 R4GMQ9 66 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 ZDBF2Q9HCK1 2354 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 LOC101059948A0A1B0GTJ6 334 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 NUDT3O95989 172 aa7.02□□□□□ -1.29
SPARC-201ENST00000231061 IGKV3-11P04433 115 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms