RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ATP5G3P48201 142 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 P2RY6Q15077 328 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 TRIP6Q15654 476 aaKnown RBP13.47□□□□□ -0.25
LTBR-201ENST00000228918 MSMPQ1L6U9 139 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 CLEC12BQ2HXU8 276 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 RPL39P5Q59GN2 51 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 TREML4Q6UXN2 200 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 OR2T10Q8NGZ9 312 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 FAM234AQ9H0X4 552 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 IFI27L2Q9H2X8 130 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 TRAV17A0A0B4J275 112 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 F2RL2O00254 374 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 RRHO14718 337 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 EREGO14944 169 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 TMPRSS2O15393 492 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 OPRK1P41145 380 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 LOXL3P58215 753 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 UBE2G2P60604 165 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 ACTL10Q5JWF8 245 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 BHLHA15Q7RTS1 189 aaPredicted RBP13.47□□□□□ -0.25
LTBR-201ENST00000228918 LINC01551Q86U37 167 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 VKORC1L1Q8N0U8 176 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 GCSAMQ8N6F7 178 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 KCNIP2Q9NS61 270 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 PROCRQ9UNN8 238 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 BDP1A6H8Y1 2624 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 LOC400499M0QZD8 3231 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 A0A1W2PPV4 95 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 XKRY2A2RUG3 117 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 GFRA3O60609 400 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 BMP5P22003 454 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 ZNF134P52741 427 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 ERVK-16P61578 105 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 RELBQ01201 579 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 PPP1R35Q8TAP8 253 aa13.46□□□□□ -0.25
LTBR-201ENST00000228918 HEYLQ9NQ87 328 aaPredicted RBP13.46□□□□□ -0.25
LTBR-201ENST00000228918 IGHV3OR15-7A0A075B7D8 119 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.26
LTBR-201ENST00000228918 CGAP01215 116 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 CFHR2P36980 270 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 TMPRSS3P57727 454 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 LRP11Q86VZ4 500 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 STARD4Q96DR4 205 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 ACY3Q96HD9 319 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 MGST2Q99735 147 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 GGTLC1Q9BX51 225 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 MS4A5Q9H3V2 200 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 PATZ1Q9HBE1 687 aaKnown RBP13.46□□□□□ -0.26
LTBR-201ENST00000228918 DKK4Q9UBT3 224 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 SLC25A15Q9Y619 301 aa13.46□□□□□ -0.26
LTBR-201ENST00000228918 DSPP15924 2871 aaKnown RBP13.45□□□□□ -0.26
LTBR-201ENST00000228918 TRAV3A0A0B4J244 114 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 CHRNA7P36544 502 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 PDLIM4P50479 330 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 CST9LP1Q5W188 147 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 KCNIP4Q6PIL6 250 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 CISD2Q8N5K1 135 aaKnown RBP13.45□□□□□ -0.26
LTBR-201ENST00000228918 FAM169BQ8N8A8 192 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 OR5T1Q8NG75 326 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 TMEM140Q9NV12 185 aa13.45□□□□□ -0.26
LTBR-201ENST00000228918 F6UZH7 168 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 GCGP01275 180 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 IGHV3-13P01766 116 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 IGHV3-7P01780 117 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 CD99P14209 185 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 WT1P19544 449 aaPredicted RBP13.44□□□□□ -0.26
LTBR-201ENST00000228918 ZNRF1Q8ND25 227 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 DDB2Q92466 427 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 S1PR3Q99500 378 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 DERL1Q9BUN8 251 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 FUT9Q9Y231 359 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 PXMP4Q9Y6I8 212 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 NDUFB4O95168 129 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 STAG3L2P0CL84 134 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 STAG3L3P0CL85 134 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 KIR2DS2P43631 304 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 NUBP1P53384 320 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 SPRNQ5BIV9 151 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 CALYQ9NYX4 217 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 TCF19Q9Y242 345 aa13.44□□□□□ -0.26
LTBR-201ENST00000228918 TRGV8A0A0C4DH27 118 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 AHRRA9YTQ3 701 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 LCN2P80188 198 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 MIC13Q5XKP0 118 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 C1orf229Q6ZS94 237 aaPredicted RBP13.43□□□□□ -0.26
LTBR-201ENST00000228918 ABHD12Q8N2K0 398 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 DSCAML1Q8TD84 2053 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 OR2V2Q96R30 315 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 ATG101Q9BSB4 218 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 IL3RAP26951 378 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 FAM78BQ5VT40 261 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 OR4S2Q8NH73 311 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 TXNDC17Q9BRA2 123 aa13.43□□□□□ -0.26
LTBR-201ENST00000228918 UTF1Q5T230 341 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 SEM1Q6ZVN7 128 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 TMEM144Q7Z5S9 345 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 MOGAT3Q86VF5 341 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 ZNF114Q8NC26 417 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 TMEM37Q8WXS4 190 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms