RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 OR4X2Q8NGF9 303 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 MRPL20Q9BYC9 149 aaKnown RBP15.59■□□□□ 0.09
CLIP2-201ENST00000223398 KBTBD11-OT1A0A1B0GTJ5 212 aa15.58■□□□□ 0.09
CLIP2-201ENST00000223398 H1FOOQ8IZA3 346 aaPredicted RBP15.58■□□□□ 0.09
CLIP2-201ENST00000223398 FBXL7Q9UJT9 491 aa15.58■□□□□ 0.09
CLIP2-201ENST00000223398 CYB561D1Q8N8Q1 229 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 GREB1Q4ZG55 1949 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 IQCJQ1A5X6 159 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 LINC00114Q6XXX2 140 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 LRP11Q86VZ4 500 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 PPP1R27Q86WC6 154 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 MYOZ3Q8TDC0 251 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 RALGAPA2Q2PPJ7 1873 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 CA2P00918 260 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 SNRPD3P62318 126 aaKnown RBP15.58■□□□□ 0.08
CLIP2-201ENST00000223398 NRN1LQ496H8 165 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 ANKRD36A6QL64 1941 aa15.58■□□□□ 0.08
CLIP2-201ENST00000223398 MDKP21741 143 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 COMPP49747 757 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 FOXG1P55316 489 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 CX3CL1P78423 397 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 ZNF146Q15072 292 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 FAM74A3Q4VXF1 159 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 LYRM2Q9NU23 88 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 TUBD1Q9UJT1 453 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 PHLDA3Q9Y5J5 127 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 DOCK6Q96HP0 2047 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 AMY1AP04745 511 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 CXCL2P19875 107 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 HERVK_113P61574 105 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 Q0VFX4 171 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 FAM74A4Q5TZK3 123 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 COLCA1Q6ZS62 124 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 GPR179Q6PRD1 2367 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 POLEQ07864 2286 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 F12P00748 615 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 HSD17B13Q7Z5P4 300 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 ITLN2Q8WWU7 325 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 OR51M1Q9H341 326 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 OR51G1Q8NGK1 321 aa15.57■□□□□ 0.08
CLIP2-201ENST00000223398 FOXA2Q9Y261 457 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-201ENST00000223398 IGKV3OR2-268A0A0C4DH90 116 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 TM4SF5O14894 197 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 ARL14EPLP0DKL9 152 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 GPR183P32249 361 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 ZNF345Q14585 488 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 TMEM187Q14656 261 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 DPPA3Q6W0C5 159 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 C17orf98A8MV24 154 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 WBP1Q96G27 269 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 C7orf66A4D0T2 115 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 PSG9Q00887 426 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 SGMS2Q8NHU3 365 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 FGFBP3Q8TAT2 258 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 DPH3Q96FX2 82 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 WFIKKN1Q96NZ8 548 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 MAP1LC3CQ9BXW4 147 aa15.56■□□□□ 0.08
CLIP2-201ENST00000223398 C8orf88P0DMB2 117 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 NCMAPQ5T1S8 102 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 CLEC19AQ6UXS0 136 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 GSX1Q9H4S2 264 aaPredicted RBP15.55■□□□□ 0.08
CLIP2-201ENST00000223398 BTF3P20290 206 aaKnown RBP15.55■□□□□ 0.08
CLIP2-201ENST00000223398 PQLC2Q6ZP29 291 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 ELOVL1Q9BW60 279 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 ESPL1Q14674 2120 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 A0A0G2JK05 382 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 ELOBQ15370 118 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 IBA57Q5T440 356 aaKnown RBP15.55■□□□□ 0.08
CLIP2-201ENST00000223398 SLC25A33Q9BSK2 321 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 PRO1933Q9H354 126 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 FAM90A26D6RGX4 464 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 LINC00271P0C7V0 271 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 LAIR2Q6ISS4 152 aa15.55■□□□□ 0.08
CLIP2-201ENST00000223398 FOXI3A8MTJ6 420 aaPredicted RBP15.54■□□□□ 0.08
CLIP2-201ENST00000223398 PTBP3O95758 552 aaKnown RBP15.54■□□□□ 0.08
CLIP2-201ENST00000223398 ZIC4Q8N9L1 334 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 ARPC1AQ92747 370 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 NABP2Q9BQ15 211 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 A8MWL6 223 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 AREGP15514 252 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 FAM53AQ6NSI3 398 aaPredicted RBP15.54■□□□□ 0.08
CLIP2-201ENST00000223398 COL4A6Q14031 1691 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 B4DEV8 164 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 ANOS1P23352 680 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 PSMB2P49721 201 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 DLX1P56177 255 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 PLPPR1Q8TBJ4 325 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 RAB24Q969Q5 203 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 METRNQ9UJH8 293 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 LINC00312Q9Y6C7 94 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 OR4A47Q6IF82 309 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 PGLYRP4Q96LB8 373 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 MRPL13Q9BYD1 178 aaKnown RBP15.54■□□□□ 0.08
CLIP2-201ENST00000223398 SH3BGRL3Q9H299 93 aa15.54■□□□□ 0.08
CLIP2-201ENST00000223398 CHAC2Q8WUX2 184 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 C19orf54Q5BKX5 351 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 GOLT1AQ6ZVE7 132 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 RTN4RL2Q86UN3 420 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 TMEM191AQ9H0A3 160 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 NPDC1Q9NQX5 325 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms