RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MIC13Q5XKP0 118 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 IGFL2Q6UWQ7 119 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 MGST2Q99735 147 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 MS4A5Q9H3V2 200 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 OPRK1P41145 380 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 KIR2DL2P43627 348 aaPredicted RBP14.3□□□□□ -0.12
USB1-201ENST00000219281 ZNF718Q3SXZ3 478 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 AARDQ4LEZ3 155 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 PDLIM3Q53GG5 364 aaPredicted RBP14.3□□□□□ -0.12
USB1-201ENST00000219281 TRAT1Q6PIZ9 186 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 ABHD12Q8N2K0 398 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 PXMP4Q9Y6I8 212 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 BOD1L1Q8NFC6 3051 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 RBFOX2O43251 390 aaKnown RBP eCLIP14.3□□□□□ -0.12
USB1-201ENST00000219281 VDAC2P45880 294 aaPredicted RBP14.3□□□□□ -0.12
USB1-201ENST00000219281 TMEM144Q7Z5S9 345 aa14.3□□□□□ -0.12
USB1-201ENST00000219281 NOL4LQ96MY1 436 aaPredicted RBP14.3□□□□□ -0.12
USB1-201ENST00000219281 MPDU1O75352 247 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 IGHG3P01860 377 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 HNF1AP20823 631 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 GUSBP1Q15486 140 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 GBGT1Q8N5D6 347 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 SFRP2Q96HF1 295 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 GGTLC1Q9BX51 225 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 TRBV20OR9-2A0A075B6H5 130 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 FAM90A9PA6NNJ1 464 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 PRSS46E5RG02 174 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 SLC31A2O15432 143 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 GFRA3O60609 400 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 NDUFB7P17568 137 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 ERVK-16P61578 105 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 C9orf106Q8NAJ2 232 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 OR2Z1Q8NG97 314 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 DUSP13Q9UII6 198 aa14.29□□□□□ -0.12
USB1-201ENST00000219281 ZFHX2Q9C0A1 2572 aaPredicted RBP14.28□□□□□ -0.12
USB1-201ENST00000219281 IGKV1D-17A0A075B6S4 117 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 A0A1B0GUS0 222 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 MDFIC2A0A1B0GVS7 189 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 SCO2A0A1W2PP80 73 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 AQP7O14520 342 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 SNRPCP09234 159 aaKnown RBP14.28□□□□□ -0.12
USB1-201ENST00000219281 OR4A8P0C604 315 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 STAG3L2P0CL84 134 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 STAG3L3P0CL85 134 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 CCKARP32238 428 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 ZNF134P52741 427 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 RELBQ01201 579 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 SSX2Q16385 188 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 FAM90A1Q86YD7 464 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 SSMEM1Q8WWF3 244 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 MISP3Q96FF7 219 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 IMMP2LQ96T52 175 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 PTPRBP23467 1997 aa14.28□□□□□ -0.12
USB1-201ENST00000219281 IGHV3OR15-7A0A075B7D8 119 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 SOX15O60248 233 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 CXorf1O96002 111 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 SSTP61278 116 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 FOXL1Q12952 345 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 IGF2-ASQ6U949 168 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 OR52E5Q8NH55 327 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 S1PR3Q99500 378 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 ELOVL5Q9NYP7 299 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 JPT1Q9UK76 154 aa14.27□□□□□ -0.12
USB1-201ENST00000219281 IGHV2OR16-5A0A0B4J2B6 119 aa14.27□□□□□ -0.13
USB1-201ENST00000219281 YPEL1O60688 119 aa14.27□□□□□ -0.13
USB1-201ENST00000219281 TCF23Q7RTU1 214 aa14.27□□□□□ -0.13
USB1-201ENST00000219281 YPEL2Q96QA6 119 aa14.27□□□□□ -0.13
USB1-201ENST00000219281 TMEM140Q9NV12 185 aa14.27□□□□□ -0.13
USB1-201ENST00000219281 TAS2R60P59551 318 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 PAX5Q02548 391 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 DEFB109BQ30KR1 87 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 MBNL2Q5VZF2 373 aaKnown RBP14.26□□□□□ -0.13
USB1-201ENST00000219281 DMRTC2Q8IXT2 367 aaPredicted RBP14.26□□□□□ -0.13
USB1-201ENST00000219281 TMEM256Q8N2U0 113 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 C1orf159Q96HA4 380 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 NDUFAF3Q9BU61 184 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 YTHDF2Q9Y5A9 579 aaKnown RBP14.26□□□□□ -0.13
USB1-201ENST00000219281 PRR14LQ5THK1 2151 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 IGHV1-18A0A0C4DH31 117 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 COL8A2P25067 703 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 TMPRSS3P57727 454 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 LOXL3P58215 753 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 UTF1Q5T230 341 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 C1orf229Q6ZS94 237 aaPredicted RBP14.26□□□□□ -0.13
USB1-201ENST00000219281 ZNRF1Q8ND25 227 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 OCC1Q8TAD7 63 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 BTF3L4Q96K17 158 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 IFI27L2Q9H2X8 130 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 TCF19Q9Y242 345 aa14.26□□□□□ -0.13
USB1-201ENST00000219281 DSPP15924 2871 aaKnown RBP14.26□□□□□ -0.13
USB1-201ENST00000219281 NUPR1O60356 82 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 THBS3P49746 956 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 USF2Q15853 346 aaPredicted RBP14.25□□□□□ -0.13
USB1-201ENST00000219281 C1orf162Q8NEQ5 155 aaPredicted RBP14.25□□□□□ -0.13
USB1-201ENST00000219281 TXNDC17Q9BRA2 123 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 C2orf88Q9BSF0 95 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 TUBG2Q9NRH3 451 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 MGST3O14880 152 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms