RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 HIPK2Q9H2X6 1198 aa14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 HEYLQ9NQ87 328 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 CARHSP1Q9Y2V2 147 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-201ENST00000216840 H2AFB1P0C5Y9 115 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 ZNF137PP52743 207 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 HSPE1P61604 102 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 TAGLNQ01995 201 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 GUK1Q16774 197 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 VWC2Q2TAL6 325 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 WDR25Q64LD2 544 aaPredicted RBP14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 LFNGQ8NES3 379 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 RAB1CQ92928 201 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 NEIL1Q96FI4 390 aaPredicted RBP14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 NABP2Q9BQ15 211 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 SEC11CQ9BY50 192 aa14.02□□□□□ -0.16
RABGGTA-201ENST00000216840 UPK2O00526 184 aa14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 F12P00748 615 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 RPP30P78346 268 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 CCL20P78556 96 aa14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 C8orf46Q8TAG6 207 aa14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 OSR1Q8TAX0 266 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 TIMD4Q96H15 378 aa14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 TIMM9Q9Y5J7 89 aa14.02□□□□□ -0.17
RABGGTA-201ENST00000216840 PPIAL4CA0A0B4J2A2 164 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 IFNA10P01566 189 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 SFTA3P0C7M3 94 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 PPIAL4GP0DN37 164 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 HOXA1P49639 335 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 SERF2P84101 59 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 GUCA2BQ16661 112 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 PUSL1Q8N0Z8 303 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 VSIRQ9H7M9 311 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 RPRMQ9NS64 109 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 PRNDQ9UKY0 176 aa14.01□□□□□ -0.17
RABGGTA-201ENST00000216840 H7C2Y5 167 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 SCAF4O95104 1147 aaKnown RBP14□□□□□ -0.17
RABGGTA-201ENST00000216840 MYOD1P15172 320 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 TLE4Q04727 773 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 TMEM177Q53S58 311 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 CENPVQ7Z7K6 275 aaPredicted RBP14□□□□□ -0.17
RABGGTA-201ENST00000216840 AIFM2Q9BRQ8 373 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 BET1LQ9NYM9 111 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 OR51B2Q9Y5P1 312 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 A0A1W2PPH5 198 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 BTBD17A6NE02 478 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 ACACBO00763 2458 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 RRHO14718 337 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 SAA1P0DJI8 122 aaPredicted RBP14□□□□□ -0.17
RABGGTA-201ENST00000216840 M6PRP20645 277 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 MDKP21741 143 aaPredicted RBP14□□□□□ -0.17
RABGGTA-201ENST00000216840 DLX1P56177 255 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 BTN1A1Q13410 526 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 PEA15Q15121 130 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 DCHS2Q6V1P9 2916 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 TMEM170AQ8WVE7 144 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 EIF5A2Q9GZV4 153 aaKnown RBP14□□□□□ -0.17
RABGGTA-201ENST00000216840 CHODLQ9H9P2 273 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 TNCP24821 2201 aa14□□□□□ -0.17
RABGGTA-201ENST00000216840 IGHV2-26A0A0B4J1V2 119 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 A0A1B0GW64 132 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 RBP4P02753 201 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 IGFBP2P18065 325 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 FGF7P21781 194 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 SVBPQ8N300 66 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 SFT2D1Q8WV19 159 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 TNFRSF14Q92956 283 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 LHX4Q969G2 390 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 FLYWCH2Q96CP2 140 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 HARBI1Q96MB7 349 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 UBTD1Q9HAC8 227 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 ZNF257Q9Y2Q1 563 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 PRSS46E5RG02 174 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 KBTBD11O94819 623 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 IL3RAP26951 378 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 ETV3LQ6ZN32 361 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 PDPNQ86YL7 162 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 TGIF2LXQ8IUE1 241 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 LY6G5BQ8NDX9 201 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 PCGF1Q9BSM1 259 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 PBDC1Q9BVG4 233 aa13.99□□□□□ -0.17
RABGGTA-201ENST00000216840 C22orf46C9J442 243 aa13.98□□□□□ -0.17
RABGGTA-201ENST00000216840 IGLV1-47P01700 117 aa13.98□□□□□ -0.17
RABGGTA-201ENST00000216840 CDKN1AP38936 164 aa13.98□□□□□ -0.17
RABGGTA-201ENST00000216840 TMEM41BQ5BJD5 291 aa13.98□□□□□ -0.17
RABGGTA-201ENST00000216840 SUN5Q8TC36 379 aa13.98□□□□□ -0.17
RABGGTA-201ENST00000216840 NKX6-2Q9C056 277 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-201ENST00000216840 TMA7Q9Y2S6 64 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-201ENST00000216840 IGSF10Q6WRI0 2623 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 TRAV1-1A0A0B4J248 108 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 PPT1P50897 306 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 PRRX1P54821 245 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 ELLP55199 621 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 PRB3Q04118 309 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 HNF4GQ14541 408 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 ZNF726P1Q15940 193 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 HLA-DRB5Q30154 266 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 OR4C13Q8NGP0 309 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 CLEC7AQ9BXN2 247 aa13.97□□□□□ -0.17
RABGGTA-201ENST00000216840 PATZ1Q9HBE1 687 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms