RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 IL4P05112 153 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 OR4D5Q8NGN0 318 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 OR10S1Q8NGN2 331 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 PRR19A6NJB7 356 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 EMP1P54849 157 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 TP53BP1Q12888 1972 aaPredicted RBP11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 POC1AQ8NBT0 407 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 OR4C13Q8NGP0 309 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 PRR33A8MZF0 331 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 TMEM262E9PQX1 116 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 DIRC2Q96SL1 478 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 SCNM1Q9BWG6 230 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 AICDAQ9GZX7 198 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 TRAV8-6A0A0B4J262 113 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 C17orf98A8MV24 154 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 DDTP30046 118 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 TIMP4Q99727 224 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 HIST1H1AQ02539 215 aaPredicted RBP11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 ICAM4Q14773 271 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 AQP10Q96PS8 301 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 P2RY6Q15077 328 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 PMCHL1Q16048 86 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 GATAD1Q8WUU5 269 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 GPR82Q96P67 336 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 ALX4Q9H161 411 aaPredicted RBP11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 TCF19Q9Y242 345 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 FOXA2Q9Y261 457 aaPredicted RBP11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 CD55P08174 381 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 GFI1BQ5VTD9 330 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 KCNS1Q96KK3 526 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 RBBP6Q7Z6E9 1792 aaKnown RBP11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 M0R381 172 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 GNG5P63218 68 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 FBXL15Q9H469 300 aa11.56□□□□□ -0.56
TGFBR3-201ENST00000212355 FAM216BQ8N7L0 139 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 DANCRP0C864 163 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 TMPRSS3P57727 454 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 PLXNA1Q9UIW2 1896 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 SMIM10L1P0DMW3 83 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 SMIM10Q96HG1 83 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 PARP14Q460N5 1801 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 LOC105371242A0A075B767 164 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 A0A0B4J293 547 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 C5orf24Q7Z6I8 188 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 MMD2Q8IY49 270 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 ARID2Q68CP9 1835 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 IL6RP08887 468 aaPredicted RBP11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 CD200R1LQ6Q8B3 271 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 FGF11Q92914 225 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 MAP1LC3AQ9H492 121 aa11.55□□□□□ -0.56
TGFBR3-201ENST00000212355 C1orf100Q5SVJ3 147 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 OR5P3Q8WZ94 311 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 LGALS3P17931 250 aaKnown RBP11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 GCHFRP30047 84 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 ATP5G2Q06055 141 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 PCSK4Q6UW60 755 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 TMEM54Q969K7 222 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 SPSB2Q99619 263 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 NYNRINQ9P2P1 1898 aaKnown RBP11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 IGHV1-69-2A0A0G2JMI3 117 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 PPP1R17O96001 155 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 KLRB1Q12918 225 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 GCSAMQ8N6F7 178 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 MRPL13Q9BYD1 178 aaKnown RBP11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 SP9P0CG40 484 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 FABP2P12104 132 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 CCDC144NLQ6NUI1 221 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 TMEM45BQ96B21 275 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 MARS2Q96GW9 593 aaKnown RBP11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 SSBP4Q9BWG4 385 aaPredicted RBP11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 NDUFA3O95167 84 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 C8orf88P0DMB2 117 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 SRD5A1P18405 259 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 UNQ9370/PRO34162Q6UXP9 181 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 RTBDNQ9BSG5 229 aaPredicted RBP11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 TRBV20OR9-2A0A075B6H5 130 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 LYNX1G3V0Z9 82 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 LYNX1P0DP58 116 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 LINC00518Q8N0U6 118 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
TGFBR3-201ENST00000212355 CTSSP25774 331 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 MFAP4P55083 255 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 HSPE1P61604 102 aaKnown RBP11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 NR2C2APQ86WQ0 139 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 OR51G1Q8NGK1 321 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 OR13A1Q8NGR1 328 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 CCL19Q99731 98 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 FGF5P12034 268 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 COX6B1P14854 86 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 MEIG1Q5JSS6 88 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 CA11O75493 328 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 ATP5J2P56134 94 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 MIR17HGQ75NE6 70 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms