RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 KIF13BQ9NQT8 1826 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 A0A1W2PQF6 199 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 GAGE13Q4V321 117 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 RBPMS2Q6ZRY4 209 aaKnown RBP8.92□□□□□ -0.98
VCL-201ENST00000211998 NABP2Q9BQ15 211 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 RGPD4Q7Z3J3 1758 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 CLDN14O95500 239 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 IGHV4-34P06331 123 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 SELENOTP62341 195 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 GAGE2BQ13066 116 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 PRSS8Q16651 343 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 OCIAD2Q56VL3 154 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 ZNF721Q8TF20 911 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 BRWD1Q9NSI6 2320 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 ZP4Q12836 540 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 ZNF441Q8N8Z8 693 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 PKIBQ9C010 78 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 FCGR2BP31994 310 aaPredicted RBP8.91□□□□□ -0.98
VCL-201ENST00000211998 CRYBA2P53672 197 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 TFF3Q07654 80 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 OR10J3Q5JRS4 329 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 WFDC3Q8IUB2 231 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 NUP37Q8NFH4 326 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 SCNM1Q9BWG6 230 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 FAM157AC9JC47 383 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 CGAP01215 116 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 C3AR1Q16581 482 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 CYTL1Q9NRR1 136 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 ADAMTS7Q9UKP4 1686 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 FOXS1O43638 330 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 ABHD12Q8N2K0 398 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 FOXC2Q99958 501 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 A0A0G2JLM5 398 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 H3BTX0 84 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
VCL-201ENST00000211998 MST1P26927 711 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 PAX2Q02962 417 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 CCDC144NLQ6NUI1 221 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 TMEM256Q8N2U0 113 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 UCN2Q96RP3 112 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 CST9LQ9H4G1 147 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 WFDC1Q9HC57 220 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 COX11Q9Y6N1 276 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 A0A1B0GWJ7 208 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 PEBP1P30086 187 aaKnown RBP8.91□□□□□ -0.98
VCL-201ENST00000211998 GFRA1P56159 465 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 KCNMB1Q16558 191 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 TPRX1Q8N7U7 411 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 TTTY12Q9BZ98 90 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 AICDAQ9GZX7 198 aa8.91□□□□□ -0.98
VCL-201ENST00000211998 ITGB1BP1O14713 200 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 MPV17L2Q567V2 206 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 ZNF479Q96JC4 524 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 SCN1AP35498 2009 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 SPAARA0A1B0GVQ0 90 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 ODAMA1E959 279 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 IL6RP08887 468 aaPredicted RBP8.9□□□□□ -0.98
VCL-201ENST00000211998 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
VCL-201ENST00000211998 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.9□□□□□ -0.98
VCL-201ENST00000211998 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 ZNF501Q96CX3 271 aaPredicted RBP8.9□□□□□ -0.98
VCL-201ENST00000211998 ZNF831Q5JPB2 1677 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 DLL1O00548 723 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 AGFG2O95081 481 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 HSD52Q0P140 79 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 CEACAM21Q3KPI0 293 aa8.9□□□□□ -0.98
VCL-201ENST00000211998 FAM90A10PA6NDY2 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A18PA6NE21 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A16PA6NEW6 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A20PA6NIJ5 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A8PA6NJQ4 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A7PA6NKC0 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A22PA8MWA6 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A12PA8MX19 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A5PA8MXJ8 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A23PA8MXZ1 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A15PP0C7V4 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A13PP0C7W8 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A14PP0C7W9 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 FAM90A24PP0C7X0 464 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 ANOS1P23352 680 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 SRSF4Q08170 494 aaKnown RBP8.9□□□□□ -0.99
VCL-201ENST00000211998 PSMG4Q5JS54 123 aa8.9□□□□□ -0.99
VCL-201ENST00000211998 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.99
VCL-201ENST00000211998 IFI6P09912 130 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 ASPHD2Q6ICH7 369 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 TMEM171Q8WVE6 324 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 C19orf24Q9BVV8 132 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 INSIG2Q9Y5U4 225 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 THSD7AQ9UPZ6 1657 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 KBTBD11-OT1A0A1B0GTJ5 212 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 ZNF525Q8N782 197 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 WDR31Q8NA23 367 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 ZNF385AQ96PM9 386 aaKnown RBP8.89□□□□□ -0.99
VCL-201ENST00000211998 KCNK17Q96T54 332 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 TRBV20OR9-2A0A075B6H5 130 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 TRAV8-4A0A0B4J246 113 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms