RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CASP6P55212 293 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 GNB2P62879 340 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 ZNF664Q8N3J9 261 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 MBD3L2Q8NHZ7 208 aaPredicted RBP10.9□□□□□ -0.67
CTNS-201ENST00000046640 AGMATQ9BSE5 352 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 C2orf88Q9BSF0 95 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 DERL1Q9BUN8 251 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 SRD5A3Q9H8P0 318 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 TMEM242Q9NWH2 141 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 DCAF16Q9NXF7 216 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 SPTA1P02549 2419 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 GPR12P47775 334 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 CYP2G1PQ6ZSU1 146 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 MRPL41Q8IXM3 137 aaKnown RBP10.89□□□□□ -0.67
CTNS-201ENST00000046640 RBMXL3Q8N7X1 1067 aaKnown RBP10.89□□□□□ -0.67
CTNS-201ENST00000046640 ZNF709Q8N972 641 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.89□□□□□ -0.67
CTNS-201ENST00000046640 C15orf65H3BRN8 121 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 M0R1X1 148 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 CEACAM4O75871 244 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 KLF3P57682 345 aaPredicted RBP10.89□□□□□ -0.67
CTNS-201ENST00000046640 FAM78BQ5VT40 261 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 OR10P1Q8NGE3 313 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 DTD1Q8TEA8 209 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 CTDSP1Q9GZU7 261 aa10.89□□□□□ -0.67
CTNS-201ENST00000046640 PATZ1Q9HBE1 687 aaKnown RBP10.89□□□□□ -0.67
CTNS-201ENST00000046640 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
CTNS-201ENST00000046640 MSMO1Q15800 293 aa10.88□□□□□ -0.67
CTNS-201ENST00000046640 CYB5R2Q6BCY4 276 aa10.88□□□□□ -0.67
CTNS-201ENST00000046640 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
CTNS-201ENST00000046640 SNRNP40Q96DI7 357 aaKnown RBP10.88□□□□□ -0.67
CTNS-201ENST00000046640 QTRT1Q9BXR0 403 aaKnown RBP10.88□□□□□ -0.67
CTNS-201ENST00000046640 YLPM1P49750 1951 aaKnown RBP10.88□□□□□ -0.67
CTNS-201ENST00000046640 TMEM14EPQ6UXP3 125 aa10.88□□□□□ -0.67
CTNS-201ENST00000046640 ATG101Q9BSB4 218 aa10.88□□□□□ -0.67
CTNS-201ENST00000046640 MRPL37Q9BZE1 423 aaKnown RBP10.88□□□□□ -0.67
CTNS-201ENST00000046640 HSPB7Q9UBY9 170 aa10.88□□□□□ -0.67
CTNS-201ENST00000046640 SRRM5B3KS81 715 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 C11orf94C9JXX5 98 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 OR9G9P0C7N8 305 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 CD33P20138 364 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 ATP5G3P48201 142 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 NUBP1P53384 320 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 EIF4EBP1Q13541 118 aaPredicted RBP10.87□□□□□ -0.67
CTNS-201ENST00000046640 DNLZQ5SXM8 178 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
CTNS-201ENST00000046640 NEU1Q99519 415 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 DSCAMO60469 2012 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 CTXND1A0A1B0GTU2 59 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 OR4A8P0C604 315 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 NPPCP23582 126 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 JOSD1Q15040 202 aaPredicted RBP10.87□□□□□ -0.67
CTNS-201ENST00000046640 C1orf185Q5T7R7 199 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 Q6ZS92 163 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 PRSS33Q8NF86 280 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 OR2T10Q8NGZ9 312 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 R3HDM4Q96D70 268 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
CTNS-201ENST00000046640 HCFC1P51610 2035 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 TRAV3A0A0B4J244 114 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 ZNF320A2RRD8 509 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 A8MWP6 167 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 CLDN14O95500 239 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 CCL8P80075 99 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 MORN2Q502X0 79 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 TIMM23BQ5SRD1 257 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 CISD2Q8N5K1 135 aaKnown RBP10.87□□□□□ -0.67
CTNS-201ENST00000046640 TMEM147Q9BVK8 224 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 NPCDR1Q9BY65 106 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 ZNRD1Q9P1U0 126 aa10.87□□□□□ -0.67
CTNS-201ENST00000046640 TPRP12270 2363 aaKnown RBP10.86□□□□□ -0.67
CTNS-201ENST00000046640 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
CTNS-201ENST00000046640 ARFGEF3Q5TH69 2177 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 MKRN2OSH3BPM6 223 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 NDUFB4O95168 129 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 HRASP01112 189 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 C1QTNF9P0C862 333 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 TCF23Q7RTU1 214 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 ZBTB34Q8NCN2 500 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 PIGBOS1A0A0B4J2F0 54 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 WNT2P09544 360 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 PAX1P15863 534 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 DUTP33316 252 aaKnown RBP10.86□□□□□ -0.67
CTNS-201ENST00000046640 GNG10P50151 68 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 OR5R1Q8NH85 324 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 CCL13Q99616 98 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 HIPK2Q9H2X6 1198 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 TP53TG5Q9Y2B4 290 aa10.86□□□□□ -0.67
CTNS-201ENST00000046640 P0C879 139 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 PRAMEF5Q5TYX0 476 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 WFDC8Q8IUA0 241 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 ZNF114Q8NC26 417 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 NEIL1Q96FI4 390 aaPredicted RBP10.85□□□□□ -0.67
CTNS-201ENST00000046640 ABHD17AQ96GS6 310 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 MGST3O14880 152 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 TGOLN2O43493 480 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 GLRXP35754 106 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 CDC34P49427 236 aaPredicted RBP10.85□□□□□ -0.67
CTNS-201ENST00000046640 THBS3P49746 956 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms