RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 OR11H6Q8NGC7 330 aa14.24□□□□□ -0.13
PHGDH-232ENST00000641947 OR13D1Q8NGV5 346 aa14.24□□□□□ -0.13
PHGDH-232ENST00000641947 PSMG3-AS1Q96PY0 264 aa14.24□□□□□ -0.13
PHGDH-232ENST00000641947 QTRT1Q9BXR0 403 aaKnown RBP14.24□□□□□ -0.13
PHGDH-232ENST00000641947 LYRM2Q9NU23 88 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-232ENST00000641947 ODF3BA8MYP8 253 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 WRBO00258 174 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 SYNGR2O43760 224 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 MMP9P14780 707 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 NUP62P37198 522 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-232ENST00000641947 RELBQ01201 579 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 NHLH2Q02577 135 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 TNFRSF9Q07011 255 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 OR4A47Q6IF82 309 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 OR2C3Q8N628 320 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 RHOVQ96L33 236 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 RBKSQ9H477 322 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 LPAR2Q9HBW0 351 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-232ENST00000641947 FBXL17Q9UF56 701 aa14.23□□□□□ -0.13
PHGDH-232ENST00000641947 RNASEK-C17orf49H0YIS7 233 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 H3BP45 60 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 GPR137BO60478 399 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 HOXB4P17483 251 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 IL3RAP26951 378 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 POU2AF1Q16633 256 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 RTL8BQ17RB0 113 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 AARDQ4LEZ3 155 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 SPINK9Q5DT21 86 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 C1orf122Q6ZSJ8 110 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 ZNF767PQ75MW2 155 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 ST8SIA2Q92186 375 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 ZNF471Q9BX82 626 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 SMIM3Q9BZL3 60 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 UNKLQ9H9P5 680 aaKnown RBP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 KPTNQ9Y664 436 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 ZANQ9Y493 2812 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 IGHV3-72A0A0B4J1Y9 119 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 FAM90A26D6RGX4 464 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 APOA2P02652 100 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 ARG1P05089 322 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 IL6RP08887 468 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 UBE2KP61086 200 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 ERVK-16P61578 105 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 EWSR1Q01844 656 aaKnown RBP eCLIP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 TAGLNQ01995 201 aaKnown RBP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 DHRS7BQ6IAN0 325 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 ZDHHC16Q969W1 377 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 RITA1Q96K30 269 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 WFDC1Q9HC57 220 aa14.22□□□□□ -0.13
PHGDH-232ENST00000641947 PAIP2BQ9ULR5 123 aaKnown RBP14.22□□□□□ -0.13
PHGDH-232ENST00000641947 PLXNB1O43157 2135 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 A0A1W2PRD5 423 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 A0A1W2PRF3 423 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 A0A1W2PRM7 423 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 FAM90A9PA6NNJ1 464 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 H7C2Y5 167 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 MYOD1P15172 320 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 PVALBP20472 110 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-232ENST00000641947 PAX6P26367 422 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 CAV2P51636 162 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 VAMP2P63027 116 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 TMEM177Q53S58 311 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 GPR157Q5UAW9 335 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 ALKAL2Q6UX46 152 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 LHFPL4Q7Z7J7 247 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 TMEM252Q8N6L7 170 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 MARVELD3Q96A59 401 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 TBX15Q96SF7 602 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 PCGF1Q9BSM1 259 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 ZC4H2Q9NQZ6 224 aa14.21□□□□□ -0.13
PHGDH-232ENST00000641947 POLR3KQ9Y2Y1 108 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-232ENST00000641947 IGHV1-3A0A0C4DH29 117 aa14.2□□□□□ -0.14
PHGDH-232ENST00000641947 A0A1W2PPI3 338 aa14.2□□□□□ -0.14
PHGDH-232ENST00000641947 FOXH1O75593 365 aa14.2□□□□□ -0.14
PHGDH-232ENST00000641947 UBA52P62987 128 aaKnown RBP14.2□□□□□ -0.14
PHGDH-232ENST00000641947 PDPNQ86YL7 162 aa14.2□□□□□ -0.14
PHGDH-232ENST00000641947 PCNPQ8WW12 178 aaKnown RBP14.2□□□□□ -0.14
PHGDH-232ENST00000641947 RAB40CQ96S21 281 aa14.2□□□□□ -0.14
PHGDH-232ENST00000641947 ZNF469Q96JG9 3925 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-232ENST00000641947 CR1P17927 2039 aa14.2□□□□□ -0.14
PHGDH-232ENST00000641947 NAV2Q8IVL1 2488 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 TXNL1O43396 289 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 HRASP01112 189 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 SAA1P0DJI8 122 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-232ENST00000641947 RPL7L1Q6DKI1 246 aaKnown RBP14.19□□□□□ -0.14
PHGDH-232ENST00000641947 STOML3Q8TAV4 291 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 HARBI1Q96MB7 349 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 WASHC3Q9Y3C0 194 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 C15orf61A6NNL5 157 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 SHOXO15266 292 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 RBMXL2O75526 392 aaKnown RBP14.19□□□□□ -0.14
PHGDH-232ENST00000641947 CST7O76096 145 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 IGLV2-23P01705 113 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 RRASP10301 218 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 HTR2BP41595 481 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 DVL1P1P54792 670 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-232ENST00000641947 TMEM267Q0VDI3 215 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-232ENST00000641947 CLEC12BQ2HXU8 276 aa14.19□□□□□ -0.14
PHGDH-232ENST00000641947 TPTE2P1Q5T6R2 138 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms