RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 VDAC2P45880 294 aaPredicted RBP6.19□□□□□ -1.42
PNKP-229ENST00000637897 KRTAP10-11P60412 298 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 SUPT4H1P63272 117 aaKnown RBP6.19□□□□□ -1.42
PNKP-229ENST00000637897 EBI3Q14213 229 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 ZNF880Q6PDB4 577 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 TMEM65Q6PI78 240 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 ZNF497Q6ZNH5 498 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 THNSL2Q86YJ6 484 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 C5orf56Q8N8D9 126 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 OR4A4PQ8NGN8 299 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 OR9G1Q8NH87 305 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 R3HDM4Q96D70 268 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 NOL4LQ96MY1 436 aaPredicted RBP6.19□□□□□ -1.42
PNKP-229ENST00000637897 NMES1Q9C002 83 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 FXYD6Q9H0Q3 95 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 AURKAIP1Q9NWT8 199 aaPredicted RBP6.19□□□□□ -1.42
PNKP-229ENST00000637897 OR6C3Q9NZP0 311 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 PITPNC1Q9UKF7 332 aa6.19□□□□□ -1.42
PNKP-229ENST00000637897 IGHV3-72A0A0B4J1Y9 119 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 PIGBOS1A0A0B4J2F0 54 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 A0A0D9SG52 128 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 FAM25EA8MYX2 175 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 C12orf77C9JDV5 145 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 TSC22D2O75157 780 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 PPYP01298 95 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 IFNA7P01567 189 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 PI3P19957 117 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 AADACP22760 399 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 S100A11P31949 105 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 REG1BP48304 166 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 KCNJ3P48549 501 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 GNG10P50151 68 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 PIGPP57054 158 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 SRPXP78539 464 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 HLA-DRB3P79483 266 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 OPCMLQ14982 345 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 ANKRD55Q3KP44 614 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 C11orf87Q6NUJ2 197 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 TEX261Q6UWH6 196 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 C16orf82Q7Z2V1 217 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 ZNF329Q86UD4 541 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 ODF3L1Q8IXM7 274 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 LINC00311Q8N616 119 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 OR8H1Q8NGG4 311 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 OR1L1Q8NH94 360 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 THAP6Q8TBB0 222 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 MRPL30Q8TCC3 161 aaKnown RBP6.18□□□□□ -1.42
PNKP-229ENST00000637897 TOMM40LQ969M1 308 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 GALNT14Q96FL9 552 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 RITA1Q96K30 269 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 RSRP1Q9BUV0 290 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 NAA60Q9H7X0 242 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 LINC00527Q9UJ94 153 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 U3KQ87 197 aa6.18□□□□□ -1.42
PNKP-229ENST00000637897 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 IGHV1-3A0A0C4DH29 117 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 C13orf42A0A1B0GVH6 325 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 K7EIL1 84 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 CCSO14618 274 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 ARPC5O15511 151 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 TUSC2O75896 110 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 IFNA21P01568 189 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 IGKV1D-33P01593 117 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 IGKV1-33P01594 117 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 PET100P0DJ07 73 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 RCC1P18754 421 aaPredicted RBP6.17□□□□□ -1.42
PNKP-229ENST00000637897 CXCL2P19875 107 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 PSMB6P28072 239 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 S100GP29377 79 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 PRRX1P54821 245 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 FXYD4P59646 89 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 RND3P61587 244 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 ZNF816Q0VGE8 651 aaPredicted RBP6.17□□□□□ -1.42
PNKP-229ENST00000637897 OR2F1Q13607 317 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 HNF4GQ14541 408 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 ZNF345Q14585 488 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 GNMTQ14749 295 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 IGSF11Q5DX21 431 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 CT45A1Q5HYN5 189 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 LCNL1Q6ZST4 164 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 TMUB2Q71RG4 321 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 ZNF546Q86UE3 836 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 LRTM2Q8N967 370 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 ZNF565Q8N9K5 539 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 Q8N9W7 124 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 OR10A7Q8NGE5 316 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 OR10J5Q8NHC4 309 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 CT45A3Q8NHU0 189 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 PPP1R1CQ8WVI7 109 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 RTN4IP1Q8WWV3 396 aaPredicted RBP6.17□□□□□ -1.42
PNKP-229ENST00000637897 WDR89Q96FK6 387 aaPredicted RBP6.17□□□□□ -1.42
PNKP-229ENST00000637897 SEC22AQ96IW7 307 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 EAF1Q96JC9 268 aaPredicted RBP6.17□□□□□ -1.42
PNKP-229ENST00000637897 C2orf50Q96LR7 162 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 FAM210AQ96ND0 272 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 CABLES2Q9BTV7 478 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 MFFQ9GZY8 342 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 SLC2A9Q9NRM0 540 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms