RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CHD3Q12873 2000 aaKnown RBP10.03□□□□□ -0.8
CLN8-212ENST00000637083 ANKRD11Q6UB99 2663 aaPredicted RBP10.03□□□□□ -0.8
CLN8-212ENST00000637083 CADP27708 2225 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 TRGV8A0A0C4DH27 118 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 A0A0G2JNJ9 132 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 HRASP01112 189 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 FBP1P09467 338 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 CD1BP29016 333 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 ZNF134P52741 427 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 RPL39P5Q59GN2 51 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 ADAM5Q6NVV9 412 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 GFRALQ6UXV0 394 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 C1orf87Q8N0U7 546 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 CA5BP1Q8WTZ4 195 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 DDB2Q92466 427 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 GAFA1Q96PS6 74 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 LINC00574Q9H8X3 128 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 KCNIP2Q9NS61 270 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 Q9UFV3 132 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 APC2O95996 2303 aa10.02□□□□□ -0.8
CLN8-212ENST00000637083 HEATR1Q9H583 2144 aaKnown RBP10.02□□□□□ -0.81
CLN8-212ENST00000637083 TRAV38-1A0A0B4J264 116 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 C15orf62A8K5M9 175 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 TMEM250H0YL14 139 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 CYB5R3P00387 301 aaPredicted RBP10.02□□□□□ -0.81
CLN8-212ENST00000637083 MDKP21741 143 aaPredicted RBP10.02□□□□□ -0.81
CLN8-212ENST00000637083 MRPS11P82912 194 aaKnown RBP10.02□□□□□ -0.81
CLN8-212ENST00000637083 RELBQ01201 579 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
CLN8-212ENST00000637083 RBPJQ06330 500 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 FAM90A2PQ658T7 463 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 SSX9Q7RTT3 188 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 PLPPR2Q96GM1 343 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 ENY2Q9NPA8 101 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 TMEM140Q9NV12 185 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 WDR83OSQ9Y284 106 aa10.02□□□□□ -0.81
CLN8-212ENST00000637083 CACNA1DQ01668 2161 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 C17orf100A8MU93 164 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 TGOLN2O43493 480 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 RPL35P42766 123 aaKnown RBP10.01□□□□□ -0.81
CLN8-212ENST00000637083 LINC00205P59089 165 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 MEF2CQ06413 473 aaPredicted RBP10.01□□□□□ -0.81
CLN8-212ENST00000637083 CT45A1Q5HYN5 189 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 HEPN1Q6WQI6 88 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 WFDC8Q8IUA0 241 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 CT45A3Q8NHU0 189 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 CTDSP1Q9GZU7 261 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 GAL3ST2Q9H3Q3 398 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 TP53TG5Q9Y2B4 290 aa10.01□□□□□ -0.81
CLN8-212ENST00000637083 SAA2-SAA4A0A096LPE2 208 aa10□□□□□ -0.81
CLN8-212ENST00000637083 hCG_1809904A0A1W2PP81 198 aa10□□□□□ -0.81
CLN8-212ENST00000637083 A0A1W2PR64 198 aa10□□□□□ -0.81
CLN8-212ENST00000637083 A0A1W2PRV1 198 aa10□□□□□ -0.81
CLN8-212ENST00000637083 ZNF727A8MUV8 499 aa10□□□□□ -0.81
CLN8-212ENST00000637083 SAA2P0DJI9 122 aaPredicted RBP10□□□□□ -0.81
CLN8-212ENST00000637083 TMPRSS3P57727 454 aa10□□□□□ -0.81
CLN8-212ENST00000637083 SNRPEP62304 92 aaKnown RBP10□□□□□ -0.81
CLN8-212ENST00000637083 FAM201AQ5SY85 155 aa10□□□□□ -0.81
CLN8-212ENST00000637083 C22orf34Q6ZV56 151 aa10□□□□□ -0.81
CLN8-212ENST00000637083 LYG1Q8N1E2 194 aa10□□□□□ -0.81
CLN8-212ENST00000637083 CISD2Q8N5K1 135 aaKnown RBP10□□□□□ -0.81
CLN8-212ENST00000637083 DEFB108BQ8NET1 73 aa10□□□□□ -0.81
CLN8-212ENST00000637083 YPEL4Q96NS1 127 aa10□□□□□ -0.81
CLN8-212ENST00000637083 CCL13Q99616 98 aa10□□□□□ -0.81
CLN8-212ENST00000637083 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
CLN8-212ENST00000637083 SDF2L1Q9HCN8 221 aa10□□□□□ -0.81
CLN8-212ENST00000637083 JKAMPQ9P055 326 aa10□□□□□ -0.81
CLN8-212ENST00000637083 NAT8Q9UHE5 227 aa10□□□□□ -0.81
CLN8-212ENST00000637083 SSUH2Q9Y2M2 353 aa10□□□□□ -0.81
CLN8-212ENST00000637083 ZNF835Q9Y2P0 537 aa10□□□□□ -0.81
CLN8-212ENST00000637083 LINC00312Q9Y6C7 94 aa10□□□□□ -0.81
CLN8-212ENST00000637083 ACACAQ13085 2346 aa10□□□□□ -0.81
CLN8-212ENST00000637083 SMCO3A2RU48 225 aa10□□□□□ -0.81
CLN8-212ENST00000637083 C5orf52A6NGY3 159 aa10□□□□□ -0.81
CLN8-212ENST00000637083 C15orf61A6NNL5 157 aa10□□□□□ -0.81
CLN8-212ENST00000637083 CLDN34H7C241 214 aa10□□□□□ -0.81
CLN8-212ENST00000637083 IGKV1D-33P01593 117 aa10□□□□□ -0.81
CLN8-212ENST00000637083 IGKV1-33P01594 117 aa10□□□□□ -0.81
CLN8-212ENST00000637083 GYPAP02724 150 aa10□□□□□ -0.81
CLN8-212ENST00000637083 S100A8P05109 93 aa10□□□□□ -0.81
CLN8-212ENST00000637083 OR4A8P0C604 315 aa10□□□□□ -0.81
CLN8-212ENST00000637083 CCKARP32238 428 aa10□□□□□ -0.81
CLN8-212ENST00000637083 VDAC2P45880 294 aaPredicted RBP10□□□□□ -0.81
CLN8-212ENST00000637083 CDC34P49427 236 aaPredicted RBP10□□□□□ -0.81
CLN8-212ENST00000637083 TFF3Q07654 80 aa10□□□□□ -0.81
CLN8-212ENST00000637083 POU2AF1Q16633 256 aa10□□□□□ -0.81
CLN8-212ENST00000637083 TMEM249Q2WGJ8 235 aa10□□□□□ -0.81
CLN8-212ENST00000637083 SPINK9Q5DT21 86 aa10□□□□□ -0.81
CLN8-212ENST00000637083 ZNF439Q8NDP4 499 aa10□□□□□ -0.81
CLN8-212ENST00000637083 RAB1CQ92928 201 aa10□□□□□ -0.81
CLN8-212ENST00000637083 SLC25A22Q9H936 323 aa10□□□□□ -0.81
CLN8-212ENST00000637083 TCF19Q9Y242 345 aa10□□□□□ -0.81
CLN8-212ENST00000637083 FOXA2Q9Y261 457 aaPredicted RBP10□□□□□ -0.81
CLN8-212ENST00000637083 PIEZO2Q9H5I5 2752 aa9.99□□□□□ -0.81
CLN8-212ENST00000637083 UBE2CO00762 179 aa9.99□□□□□ -0.81
CLN8-212ENST00000637083 SLC31A2O15432 143 aa9.99□□□□□ -0.81
CLN8-212ENST00000637083 OPRK1P41145 380 aa9.99□□□□□ -0.81
CLN8-212ENST00000637083 RPS10P46783 165 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms