RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MOB3AQ96BX8 217 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 ATP23Q9Y6H3 246 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 IGKV1D-13A0A0B4J2D9 117 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 SH2D1BO14796 132 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 SPRY3O43610 288 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 KALRNO60229 2985 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 PSPNO60542 156 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 IGKV1-13P0DP09 117 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 ECI1P42126 302 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 Q8IYB0 196 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 FAM169BQ8N8A8 192 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 FAM213BQ8TBF2 198 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 C1orf123Q9NWV4 160 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 HAND1O96004 215 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 P2RY1P47900 373 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 ERVFC1-1P60608 527 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 LDLRAD2Q5SZI1 272 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 CYB561D1Q8N8Q1 229 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 TRAPPC2LQ9UL33 140 aa9.64□□□□□ -0.87
CLN6-217ENST00000636964 TRGV8A0A0C4DH27 118 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 C16orf97H3BN30 126 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 C1QTNF9P0C862 333 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 GLIPR1P48060 266 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 RAB7AP51149 207 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 ZNF835Q9Y2P0 537 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 KIR2DS1A0A191URI9 304 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 PRH1P02810 166 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 OR4A8P0C604 315 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 CHRNB4P30926 498 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 GNRHRP30968 328 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 KIR2DS4P43632 304 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 UBE2KP61086 200 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 KIR2DS1Q14954 304 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 ZNF146Q15072 292 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 TM4SF20Q53R12 229 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 MRGPRGQ86SM5 289 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 LRRC29Q8WV35 223 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 TMEM171Q8WVE6 324 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 NAA60Q9H7X0 242 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 OR1A1Q9P1Q5 309 aa9.63□□□□□ -0.87
CLN6-217ENST00000636964 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 FBLL1A6NHQ2 334 aaKnown RBP9.62□□□□□ -0.87
CLN6-217ENST00000636964 TNFSF12O43508 249 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 CD40P25942 277 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 GLRXP35754 106 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 ARF6P62330 175 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 ICAM4Q14773 271 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 TMEM144Q7Z5S9 345 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 CMTM1Q8IZ96 169 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 TPRX1Q8N7U7 411 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 PPP1R35Q8TAP8 253 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 PHF1O43189 567 aaPredicted RBP9.62□□□□□ -0.87
CLN6-217ENST00000636964 AESQ08117 197 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 OCIAD2Q56VL3 154 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 PCSK4Q6UW60 755 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 ACP7Q6ZNF0 438 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 ZNF818PQ6ZRF7 136 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 ZNF429Q86V71 674 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 CCL28Q9NRJ3 127 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 TAAR3PQ9P1P4 343 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 IL6RP08887 468 aaPredicted RBP9.62□□□□□ -0.87
CLN6-217ENST00000636964 COL5A1-AS1Q5SY13 56 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 Q6ZS49 121 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 GAPTQ8N292 157 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 OR13D1Q8NGV5 346 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 OR2V2Q96R30 315 aa9.62□□□□□ -0.87
CLN6-217ENST00000636964 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 H0Y8G0 127 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 EGR1P18146 543 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 UCNP55089 124 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 FAM201AQ5SY85 155 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 FAM53AQ6NSI3 398 aaPredicted RBP9.61□□□□□ -0.87
CLN6-217ENST00000636964 ZNF497Q6ZNH5 498 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 RNASEH2CQ8TDP1 164 aaKnown RBP9.61□□□□□ -0.87
CLN6-217ENST00000636964 PBDC1Q9BVG4 233 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 ACTR3CQ9C0K3 210 aaPredicted RBP9.61□□□□□ -0.87
CLN6-217ENST00000636964 HES4Q9HCC6 221 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 ERRFI1Q9UJM3 462 aaPredicted RBP9.61□□□□□ -0.87
CLN6-217ENST00000636964 IGHV3OR15-7A0A075B7D8 119 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 DVL1O14640 695 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 IGHV3-13P01766 116 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 HLA-DRB3P79483 266 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 RBPJQ06330 500 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 TMEM187Q14656 261 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 MOGAT3Q86VF5 341 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 RND1Q92730 232 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 UCP3P55916 312 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 COL10A1Q03692 680 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 TEX38Q6PEX7 206 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 PINX1Q96BK5 328 aaKnown RBP9.61□□□□□ -0.87
CLN6-217ENST00000636964 C5orf30Q96GV9 206 aa9.61□□□□□ -0.87
CLN6-217ENST00000636964 LOC105371242A0A075B767 164 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 DPRXA6NFQ7 191 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 MPPED1O15442 326 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 THBDP07204 575 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 ARL3P36405 182 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms